@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1610: (2016-01-31 )
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7SB_C_8(4CL6)
FABA_PSEAE
[Raw transfer]




54F_A_3(4B0B)
FABA_PSEAE
[Raw transfer]




7SB_B_7(4CL6)
FABA_PSEAE
[Raw transfer]




7SB_E_10(4CL6)
FABA_PSEAE
[Raw transfer]




7SB_A_6(4CL6)
FABA_PSEAE
[Raw transfer]




7SB_D_9(4CL6)
FABA_PSEAE
[Raw transfer]




1R3_A_5(4KEH)
FABA_ECOLI
[Raw transfer]




C9H_B_7(4B0C)
FABA_PSEAE
[Raw transfer]




C9H_C_8(4B0C)
FABA_PSEAE
[Raw transfer]




1R3_B_6(4KEH)
FABA_ECOLI
[Raw transfer]




C9H_D_9(4B0C)
FABA_PSEAE
[Raw transfer]




KBP_D_9(4B0I)
FABA_PSEAE
[Raw transfer]




KBP_E_10(4B0I)
FABA_PSEAE
[Raw transfer]




C9H_A_6(4B0C)
FABA_PSEAE
[Raw transfer]




IBK_B_6(4B8U)
FABA_PSEAE
[Raw transfer]




KBP_C_8(4B0I)
FABA_PSEAE
[Raw transfer]




KBP_B_7(4B0I)
FABA_PSEAE
[Raw transfer]




KBP_A_6(4B0I)
FABA_PSEAE
[Raw transfer]




DAC_A_3(1MKA)
FABA_ECOLI
[Raw transfer]




DAC_B_4(1MKA)
FABA_ECOLI
[Raw transfer]




DAC_A_3(1MKA)
FABA_ECOLI
[Raw transfer]




C9H_E_10(4B0C)
FABA_PSEAE
[Raw transfer]




MES_A_3(3Q62)
FABA_YERPS
[Raw transfer]




MES_A_3(3Q62)
FABA_YERPS
[Raw transfer]




MES_A_4(3Q62)
FABA_YERPS
[Raw transfer]




54 PsiBlast_CBE 98.62100%-142 - C8 -4FQ9 - FABA_PSEAE -
23 PsiBlast_CBE 98.37100%-145 - C8 -4CL6 3.9 FABA_PSEAE
61 PsiBlast_CBE 98.09100%-139 - C8 -4FQ9 - FABA_PSEAE -
51 PsiBlast_CBE 98.08100%-142 - C8 -4B0C 3.9 FABA_PSEAE
49 PsiBlast_CBE 98.03100%-144 - C8 -4B0C 3.8 FABA_PSEAE
62 PsiBlast_CBE 97.9099%-144 - C8 -4B0I 2.8 FABA_PSEAE
6 PsiBlast_PDB 97.89100%-140 - C8 -4FQ9 - FABA_PSEAE -
55 PsiBlast_CBE 97.74100%-139 - C8 -4FQ9 - FABA_PSEAE -
56 PsiBlast_CBE 97.72100%-140 - C8 -4FQ9 - FABA_PSEAE -
53 PsiBlast_CBE 97.59100%-140 - C8 -4FQ9 - FABA_PSEAE -
63 PsiBlast_CBE 97.5899%-141 - C8 -4B0I 2.8 FABA_PSEAE
24 PsiBlast_CBE 97.58100%-141 - C8 -4CL6 4.2 FABA_PSEAE
44 PsiBlast_CBE 97.50100%-141 - C8 -4B0J - FABA_PSEAE -
1 PsiBlast_PDB 97.46100%-142 - C8 -4B8U - FABA_PSEAE -
52 PsiBlast_CBE 97.45100%-144 - C8 -4B0B 3.2 FABA_PSEAE
21 PsiBlast_CBE 97.41100%-141 - C8 -4CL6 4.4 FABA_PSEAE
57 PsiBlast_CBE 97.37100%-140 - C8 -4FQ9 - FABA_PSEAE -
59 PsiBlast_CBE 97.28100%-139 - C8 -4FQ9 - FABA_PSEAE -
48 PsiBlast_CBE 97.28100%-142 - C8 -4B0C 4.3 FABA_PSEAE
29 PsiBlast_CBE 97.24100%-144 - C8 -4B0J - FABA_PSEAE -
3 PsiBlast_PDB 97.18100%-144 - C8 -4B0C 3.9 FABA_PSEAE
5 PsiBlast_PDB 96.88100%-141 - C8 -4CL6 4.2 FABA_PSEAE
50 PsiBlast_CBE 96.80100%-142 - C8 -4B0C 4.0 FABA_PSEAE
22 PsiBlast_CBE 96.65100%-141 - C8 -4CL6 3.9 FABA_PSEAE
28 PsiBlast_CBE 96.64100%-144 - C8 -4B8U 3.2 FABA_PSEAE
64 PsiBlast_CBE 96.2599%-137 - C8 -4B0I 2.9 FABA_PSEAE
7 PsiBlast_PDB 95.5299%-141 - C8 -4B0I 2.9 FABA_PSEAE
65 PsiBlast_CBE 95.2399%-139 - C8 -4B0I 3.5 FABA_PSEAE
90 Fugue 88.4167%-139 - C8 -1MKA 3.2 FABA_ECOLI
9 PsiBlast_PDB 88.0768%-139 - C8 -1MKA 3.2 FABA_ECOLI
67 PsiBlast_CBE 86.5668%-139 - C8 -1MKA 3.3 FABA_ECOLI
66 PsiBlast_CBE 85.8568%-141 * C8 *4KEH 2.3 FABA_ECOLI
10 PsiBlast_PDB 85.7868%-142 - C8 -4KEH 2.2 FABA_ECOLI
12 PsiBlast_PDB 85.5966%-138 - C8 -3Q62 2.3 FABA_YERPS
69 HHSearch 85.3765%-140 - C8 -3Q62 2.3 FABA_YERPS
68 PsiBlast_CBE 85.0766%-135 - C8 -3Q62 3.1 FABA_YERPS