@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1618: (2016-01-31 )
MSLWRQTPDLEQLNASQKNSIGDLLGIRFEAFDDESLTASMPVDSRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVGLEVNANHLRGLRSGRVTAVARAIHLGRTTHVWDIRLSGDDGKPSCIARLTMAVVPLAGRAG

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

31B_F_8(4QD9)
Y1618_PSEAE
[Raw transfer]



0FQ_C_8(4QD8)
Y1618_PSEAE
[Raw transfer]



0FQ_C_7(4QD8)
Y1618_PSEAE
[Raw transfer]



0FQ_D_9(4QD8)
Y1618_PSEAE
[Raw transfer]



31B_D_7(4QD9)
Y1618_PSEAE
[Raw transfer]



0FQ_D_10(4QD8)
Y1618_PSEAE
[Raw transfer]



0FQ_B_6(4K4A)
MENI_ECOLI
[Raw transfer]



HFQ_D_7(4K49)
MENI_ECOLI
[Raw transfer]



UOQ_B_12(4K4B)
MENI_ECOLI
[Raw transfer]



0FQ_C_7(4K4A)
MENI_ECOLI
[Raw transfer]



HFQ_B_6(4K49)
MENI_ECOLI
[Raw transfer]



0FQ_A_5(4K4A)
MENI_ECOLI
[Raw transfer]



UOQ_H_23(4K4B)
MENI_ECOLI
[Raw transfer]



HFQ_C_5(4K49)
MENI_ECOLI
[Raw transfer]



HFQ_A_8(4K49)
MENI_ECOLI
[Raw transfer]



0FQ_D_8(4K4A)
MENI_ECOLI
[Raw transfer]



UOQ_E_18(4K4B)
MENI_ECOLI
[Raw transfer]



UOQ_B_13(4K4B)
MENI_ECOLI
[Raw transfer]



HFQ_A_3(4K4D)
ENTH_ECOLI
[Raw transfer]



UOQ_C_14(4K4B)
MENI_ECOLI
[Raw transfer]



UOQ_F_20(4K4B)
MENI_ECOLI
[Raw transfer]



UOQ_A_11(4K4B)
MENI_ECOLI
[Raw transfer]



UOQ_E_19(4K4B)
MENI_ECOLI
[Raw transfer]
25 PsiBlast_CBE 99.63100%-135 - C1 -4QD8 2.4 Y1618_PSEAE
24 PsiBlast_CBE 99.35100%-135 - C1 -4QD9 2.7 Y1618_PSEAE
26 PsiBlast_CBE 98.64100%-135 - C1 -4QD8 2.4 Y1618_PSEAE
23 PsiBlast_CBE 98.42100%-133 - C1 -4QD9 - Y1618_PSEAE -
27 PsiBlast_CBE 98.28100%-132 - C1 -4QD8 3.7 Y1618_PSEAE
22 PsiBlast_CBE 98.22100%-134 - C1 -4QD9 3.0 Y1618_PSEAE
21 PsiBlast_CBE 98.16100%-133 - C1 -4QD9 - Y1618_PSEAE -
4 PsiBlast_PDB 97.4999%-135 - C1 -4QDB - Y1618_PSEAE -
28 PsiBlast_CBE 97.31100%-128 - C1 -4QD8 3.1 Y1618_PSEAE
3 PsiBlast_PDB 97.2499%-134 - C1 -4QDA - Y1618_PSEAE -
1 PsiBlast_PDB 96.82100%-133 - C1 -4QD8 - Y1618_PSEAE -
2 PsiBlast_PDB 96.63100%-130 - C1 -4QD9 - Y1618_PSEAE -
30 PsiBlast_CBE 82.8352%-117 - C1 -4K4B 3.4 MENI_ECOLI
37 PsiBlast_CBE 81.9752%-118 - C1 -4K4A 3.6 MENI_ECOLI
36 PsiBlast_CBE 81.9152%-118 - C1 -4K4A 3.8 MENI_ECOLI
31 PsiBlast_CBE 81.7552%-116 - C1 -4K4B 2.8 MENI_ECOLI
9 PsiBlast_PDB 81.6052%-117 - C1 -4K4A 4.1 MENI_ECOLI
8 PsiBlast_PDB 81.2652%-117 - C1 -4K49 2.8 MENI_ECOLI
29 PsiBlast_CBE 81.2552%-116 - C1 -4K4B 3.1 MENI_ECOLI
40 PsiBlast_CBE 81.1852%-118 - C1 -4K49 3.4 MENI_ECOLI
10 PsiBlast_PDB 80.9752%-114 - C1 -4K4B 3.6 MENI_ECOLI
41 PsiBlast_CBE 80.7852%-119 - C1 -4K49 4.2 MENI_ECOLI
39 PsiBlast_CBE 80.7552%-119 - C1 -4K49 2.9 MENI_ECOLI
38 PsiBlast_CBE 80.7152%-119 - C1 -4K4A 3.1 MENI_ECOLI
35 PsiBlast_CBE 80.4952%-113 - C1 -4K4B 2.7 MENI_ECOLI
33 PsiBlast_CBE 80.2152%-116 - C1 -4K4B 2.6 MENI_ECOLI
32 PsiBlast_CBE 80.0752%-115 - C1 -4K4B 3.6 MENI_ECOLI
34 PsiBlast_CBE 79.8252%-116 - C1 -4K4B 2.5 MENI_ECOLI
50 PsiBlast_CBE 72.9544%-105 * C1 *4K4D 2.6 ENTH_ECOLI