@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1631: (2016-01-31 )
MIRDPETLNLLLDSIRQFVRESLVPHEQEVAETDRIPEAIIARMREMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIVIDGTEEQKRRYLPRLASGELLSSFCLTEPDSGSDAASLKTTAVRDGEHYVLNGTKRFITNAPQAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQKGAHTCDVIFDDCRVPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPIAEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTEASCAKLFASEMCGRVADRAVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNMIRAAQG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UCC_B_6(4Y9J)
?
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_C_3(2DVL)
?
[Raw transfer]



FAD_D_4(2DVL)
?
[Raw transfer]



FAD_A_3(3B96)
ACADV_HUMAN
[Raw transfer]



FAD_B_4(2D29)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_A_4(1UKW)
?
[Raw transfer]



FAD_A_4(1UKW)
?
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



COS_B_9(4L1F)
?
[Raw transfer]



FDA_B_15(4N5F)
?
[Raw transfer]



UNL_A_5(3SF6)
?
[Raw transfer]



FAD_B_7(3MDD)
ACADM_PIG
[Raw transfer]



UNL_A_3(3SF6)
?
[Raw transfer]



UNL_A_9(3SF6)
?
[Raw transfer]
122 HHSearch 89.0839% -86 - C1 -2UXW 10.0 ACADV_HUMAN
67 PsiBlast_CBE 88.2536% -89 - C1 -2JIF - ACDSB_HUMAN -
115 HHSearch 88.0740% -84 - C1 -3PFD - ? -
69 PsiBlast_CBE 87.8436% -89 - C1 -2JIF - ACDSB_HUMAN -
17 PsiBlast_PDB 87.8340% -87 - C1 -2UXW 10.0 ACADV_HUMAN
68 PsiBlast_CBE 87.7336% -90 - C1 -2JIF - ACDSB_HUMAN -
70 PsiBlast_CBE 86.9636% -89 - C1 -2JIF - ACDSB_HUMAN -
124 Fugue 86.8638% -81 - C1 -2UXW 10.0 ACADV_HUMAN
108 HHSearch 86.8035% -87 - C1 -2JIF - ACDSB_HUMAN -
5 PsiBlast_PDB 86.7940% -78 - C1 -4L1F 6.5 ?
27 PsiBlast_CBE 86.7640% -78 - C1 -4L1F 7.1 ?
71 PsiBlast_CBE 86.5141% -81 - C1 -2D29 8.7 ?
18 PsiBlast_PDB 86.1440% -84 - C1 -3B96 9.3 ACADV_HUMAN
125 Fugue 86.1341% -85 - C1 -2Z1Q 7.9 ?
58 PsiBlast_CBE 86.1338% -82 - C1 -1JQI - ACADS_RAT -
113 HHSearch 86.0341% -77 - C1 -1UKW 9.5 ?
2 PsiBlast_PDB 86.0041% -79 - C1 -3PFD - ? -
33 PsiBlast_CBE 85.9341% -83 - C1 -4M9A - ? -
118 HHSearch 85.8942% -79 - C1 -2D29 8.4 ?
32 PsiBlast_CBE 85.8441% -83 - C1 -4M9A - ? -
7 PsiBlast_PDB 84.9743% -84 - C1 -2DVL 8.1 ?
72 PsiBlast_CBE 84.9541% -80 - C1 -2D29 8.4 ?
123 Fugue 84.7937% -79 - C1 -3MDD 4.7 ACADM_PIG
66 PsiBlast_CBE 84.7140% -89 - C1 -2Z1Q 7.9 ?
31 PsiBlast_CBE 83.4343% -80 - C1 -2DVL 8.2 ?
4 PsiBlast_PDB 82.1042% -74 - C1 -1UKW 9.5 ?
21 PsiBlast_CBE 81.1742% -83 - C1 -4N5F 7.8 ?
120 HHSearch 77.2937% -75 - C1 -1BUC 9.0 ACDS_MEGEL
114 HHSearch 77.0231% -80 - C1 -3SF6 2.8 ?
93 PsiBlast_CBE 72.9437% -73 - C1 -1BUC 9.0 ACDS_MEGEL