@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1648: (2016-01-31 )
MTSQINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(2ZB8)
PTGR2_HUMAN
[Raw transfer]



NAP_B_10(1V3V)
PTGR1_CAVPO
[Raw transfer]



NAP_A_3(2DM6)
PTGR1_CAVPO
[Raw transfer]



NAP_A_2(2VNA)
PTGR2_HUMAN
[Raw transfer]



NAP_A_9(1V3V)
PTGR1_CAVPO
[Raw transfer]



NAP_B_4(2DM6)
PTGR1_CAVPO
[Raw transfer]



NDP_A_2(2ZB7)
PTGR2_HUMAN
[Raw transfer]



NAP_C_3(1V3T)
PTGR1_CAVPO
[Raw transfer]



NAP_A_2(2W4Q)
PTGR2_HUMAN
[Raw transfer]



NAP_A_3(4NH4)
?
[Raw transfer]



NAP_A_3(4HFM)
DBR_TOBAC
[Raw transfer]



NAP_D_4(1V3T)
PTGR1_CAVPO
[Raw transfer]



NAP_A_6(2ZB4)
PTGR2_HUMAN
[Raw transfer]



NAP_B_10(2W98)
PTGR2_HUMAN
[Raw transfer]



NDP_A_2(2ZB3)
PTGR2_MOUSE
[Raw transfer]



NAP_B_4(4NH4)
?
[Raw transfer]



NAP_A_3(4HFN)
DBR_TOBAC
[Raw transfer]



NAP_B_5(4HFN)
DBR_TOBAC
[Raw transfer]



NAP_B_5(2J3J)
P1_ARATH
[Raw transfer]



NAP_A_3(2J3K)
P1_ARATH
[Raw transfer]



NAP_A_5(2Y05)
PTGR1_HUMAN
[Raw transfer]



NAP_A_3(2J3I)
P1_ARATH
[Raw transfer]



NAP_B_4(2J3I)
P1_ARATH
[Raw transfer]



NAP_A_3(2J3J)
P1_ARATH
[Raw transfer]



NAP_B_5(2J3K)
P1_ARATH
[Raw transfer]



5OP_B_12(1V3V)
PTGR1_CAVPO
[Raw transfer]



NCA_A_3(2ZB7)
PTGR2_HUMAN
[Raw transfer]



CIY_A_4(4HFN)
DBR_TOBAC
[Raw transfer]



5OP_A_11(1V3V)
PTGR1_CAVPO
[Raw transfer]
35 PsiBlast_CBE 97.38100%-118 - C1 -4B7C - ? -
1 PsiBlast_PDB 97.19100%-116 - C1 -4B7C - ? -
34 PsiBlast_CBE 97.13100%-117 - C1 -4B7C - ? -
32 PsiBlast_CBE 97.06100%-117 - C1 -4B7C - ? -
33 PsiBlast_CBE 96.76100%-120 - C1 -4B7C - ? -
36 PsiBlast_CBE 96.60100%-119 - C1 -4B7C - ? -
25 PsiBlast_CBE 95.70100%-112 - C1 -4B7X - ? -
29 PsiBlast_CBE 95.02100%-116 - C1 -4B7X - ? -
23 PsiBlast_CBE 95.01100%-114 - C1 -4B7X - ? -
21 PsiBlast_CBE 94.79100%-115 - C1 -4B7X - ? -
28 PsiBlast_CBE 94.69100%-110 - C1 -4B7X - ? -
2 PsiBlast_PDB 94.58100%-108 - C1 -4B7X - ? -
27 PsiBlast_CBE 94.31100%-110 - C1 -4B7X - ? -
31 PsiBlast_CBE 93.98100%-111 - C1 -4B7X - ? -
26 PsiBlast_CBE 93.74100%-116 - C1 -4B7X - ? -
30 PsiBlast_CBE 93.15100%-112 - C1 -4B7X - ? -
22 PsiBlast_CBE 86.91100%-114 - C1 -4B7X - ? -
24 PsiBlast_CBE 81.26100%-116 - C1 -4B7X - ? -
14 PsiBlast_PDB 73.3438%-103 - C1 -2ZB8 11.0 PTGR2_HUMAN
15 PsiBlast_PDB 73.1338%-102 - C1 -2W4Q 10.2 PTGR2_HUMAN
12 PsiBlast_PDB 72.2838%-102 - C1 -2ZB4 10.9 PTGR2_HUMAN
42 PsiBlast_CBE 71.9438%-103 - C1 -2W98 10.9 PTGR2_HUMAN
13 PsiBlast_PDB 71.2138%-101 - C1 -2ZB7 11.0 PTGR2_HUMAN
16 PsiBlast_PDB 70.8138%-103 - C1 -2VNA 10.0 PTGR2_HUMAN
20 PsiBlast_PDB 70.2238% -94 - C1 -2DM6 11.0 PTGR1_CAVPO
43 PsiBlast_CBE 69.8738% -92 - C1 -2DM6 10.7 PTGR1_CAVPO
44 PsiBlast_CBE 69.4238% -93 - C1 -1V3V 10.6 PTGR1_CAVPO
4 PsiBlast_PDB 68.8642% -98 - C1 -4NH4 10.7 ?
38 PsiBlast_CBE 68.7642%-100 - C1 -4HFN 7.8 DBR_TOBAC
37 PsiBlast_CBE 68.5342% -98 - C1 -4NH4 9.8 ?
46 PsiBlast_CBE 68.5238% -93 - C1 -1V3T 10.6 PTGR1_CAVPO
19 PsiBlast_PDB 68.4738% -93 - C1 -1V3V 10.2 PTGR1_CAVPO
9 PsiBlast_PDB 68.4739% -92 - C1 -2J3I 8.4 P1_ARATH
47 PsiBlast_CBE 68.4138%-107 - C1 -2ZB3 10.2 PTGR2_MOUSE
17 PsiBlast_PDB 68.3438% -94 - C1 -1V3T 10.2 PTGR1_CAVPO
10 PsiBlast_PDB 68.3339% -90 - C1 -2J3J 10.1 P1_ARATH
11 PsiBlast_PDB 67.9439% -91 - C1 -2J3K 9.0 P1_ARATH
55 PsiBlast_CBE 67.9235% -89 - C1 -2Y05 10.4 PTGR1_HUMAN
39 PsiBlast_CBE 67.5239% -94 - C1 -2J3K 8.7 P1_ARATH
40 PsiBlast_CBE 67.1939% -90 - C1 -2J3J 9.8 P1_ARATH
41 PsiBlast_CBE 66.3139% -95 - C1 -2J3I 6.8 P1_ARATH
7 PsiBlast_PDB 66.1042% -98 - C1 -4HFN 10.8 DBR_TOBAC
6 PsiBlast_PDB 65.9642% -95 - C1 -4HFM 11.2 DBR_TOBAC