@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1654: (2016-01-31 )
MPFSERISRLKSSLIREILAAAQRPEVMSFAGGLPAEPMLPKVQWEQMPASMGQYGMSEGEPALREAIAAEARALGVPCEASQVLIVSGSQQTLDLASKLFIDPGTEVLLEAPTYLAALQAFQLFGADCVTVPLGAEGPDLVALRQRLERHKPAFAYLIPTFQNPSGVRYSEERRDAVAALLDEFGVTLIEDEPYRELVFDEGRATPLVSRLRKSSWIYTGTVSKTLLPGLRVGFLIATPDLFPHLLRLKQSADLHTNRVGQWQALQWFGSEAYRQHLAELREFYRVRRDAMQEALLEHFGELAEWNIPEGGLFFWLTLRQPLDTRTLLQPALAADVAFMPGEPFFAEPEQNLGRLRLNFSHVAPERLHEGLRRLAKVVRDAQAAEAA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGU_B_4(2ZYJ)
LYSN_THET2
[Raw transfer]



N5F_B_4(3CBF)
LYSN_THET2
[Raw transfer]



N5F_A_3(3CBF)
LYSN_THET2
[Raw transfer]



PGU_A_3(2ZYJ)
LYSN_THET2
[Raw transfer]



PGU_A_3(2ZYJ)
LYSN_THET2
[Raw transfer]



PMP_C_6(3AV7)
?
[Raw transfer]



PMP_A_3(3AV7)
?
[Raw transfer]



PMP_C_8(3WX9)
?
[Raw transfer]



PMP_A_3(3WX9)
?
[Raw transfer]



PLP_A_3(3AOW)
?
[Raw transfer]



PLP_C_4(3AOV)
?
[Raw transfer]



PLP_C_5(3AOW)
?
[Raw transfer]



PLP_A_3(1WST)
?
[Raw transfer]



PLP_C_6(3ATH)
?
[Raw transfer]



PLP_A_3(1VP4)
?
[Raw transfer]



PLP_A_3(1VP4)
?
[Raw transfer]



AKG_C_8(3ATH)
?
[Raw transfer]



LEU_A_3(2Z1Y)
LYSN_THET2
[Raw transfer]



LEU_B_4(2Z1Y)
LYSN_THET2
[Raw transfer]



KYN_A_4(3AV7)
?
[Raw transfer]



3EE_C_11(3WX9)
?
[Raw transfer]



3EE_A_6(3WX9)
?
[Raw transfer]



AKG_C_6(3AOW)
?
[Raw transfer]



KYN_C_7(3AV7)
?
[Raw transfer]



KYA_C_8(3AV7)
?
[Raw transfer]



BF5_A_3(2XH1)
AADAT_HUMAN
[Raw transfer]



KYA_A_5(3AV7)
?
[Raw transfer]
43 HHSearch 93.5140%-102 - C1 -2ZYJ 9.7 LYSN_THET2
27 PsiBlast_CBE 93.2440%-104 - C1 -2ZYJ 9.3 LYSN_THET2
10 PsiBlast_PDB 92.2240%-105 - C1 -3CBF 10.0 LYSN_THET2
39 HHSearch 92.0532% -97 * C1 *1VP4 4.9 ?
12 PsiBlast_PDB 92.0140%-104 - C1 -2ZYJ 9.7 LYSN_THET2
32 PsiBlast_CBE 91.4940%-105 - C1 -2ZP7 - LYSN_THET2 -
4 PsiBlast_PDB 91.4836%-100 - C1 -3AV7 5.4 ?
33 PsiBlast_CBE 91.2740%-102 - C1 -2Z1Y 9.6 LYSN_THET2
31 PsiBlast_CBE 91.1140%-105 - C1 -2ZP7 - LYSN_THET2 -
40 HHSearch 90.7437% -98 - C1 -3AOW 4.8 ?
5 PsiBlast_PDB 90.5936% -97 - C1 -3WX9 6.8 ?
1 PsiBlast_PDB 90.4136% -96 - C1 -3AOV - ? -
29 PsiBlast_CBE 90.3040%-104 - C1 -2ZP7 - LYSN_THET2 -
22 PsiBlast_CBE 90.0836% -97 - C1 -3AV7 5.4 ?
26 PsiBlast_CBE 90.0640%-103 - C1 -3CBF 10.2 LYSN_THET2
6 PsiBlast_PDB 89.4836%-100 - C1 -1X0M - ? -
21 PsiBlast_CBE 89.4236% -97 - C1 -3WX9 6.5 ?
3 PsiBlast_PDB 89.3436% -96 - C1 -3ATH - ? -
35 PsiBlast_CBE 89.3140%-101 - C1 -2EGY - LYSN_THET2 -
2 PsiBlast_PDB 89.2536% -96 - C1 -3AOW - ? -
25 PsiBlast_CBE 88.7836% -97 - C1 -3AOV 3.9 ?
23 PsiBlast_CBE 88.6736% -98 - C1 -3ATH 4.7 ?
11 PsiBlast_PDB 88.3240%-103 - C1 -2Z1Y 9.4 LYSN_THET2
24 PsiBlast_CBE 88.2836% -96 - C1 -3AOW 4.4 ?
13 PsiBlast_PDB 85.9031% -96 - C1 -1VP4 4.9 ?
7 PsiBlast_PDB 81.8337% -95 - C1 -1WST 4.9 ?