@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1687: (2016-01-31 )
MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFENARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFVATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTAARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLRRLPLETLRQRFRDSGIATRYYNADIHLGAFALPQYVLQAIGKQDND

Atome Classification :

(78 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AAT_A_4(2I7C)
?
[Raw transfer]



AAT_B_5(2I7C)
?
[Raw transfer]



AAT_A_4(2I7C)
?
[Raw transfer]



AAT_C_6(2I7C)
?
[Raw transfer]



AAT_E_5(1JQ3)
SPEE_THEMA
[Raw transfer]



SPD_C_6(2PWP)
?
[Raw transfer]



AAT_G_7(1JQ3)
SPEE_THEMA
[Raw transfer]



S4M_D_9(4YV1)
?
[Raw transfer]



AG3_C_10(2E5W)
SPEE_PYRHO
[Raw transfer]



S4M_B_5(4YUW)
?
[Raw transfer]



JFQ_B_8(3RIE)
?
[Raw transfer]



S4M_A_3(4YUW)
?
[Raw transfer]



S4M_C_10(4BP3)
?
[Raw transfer]



S4M_C_10(2PT9)
?
[Raw transfer]



JFQ_C_12(3RIE)
?
[Raw transfer]



S4M_B_7(4BP3)
?
[Raw transfer]



S4M_A_5(4BP3)
?
[Raw transfer]



S4M_A_5(2PT9)
?
[Raw transfer]



S4M_B_8(2PT9)
?
[Raw transfer]



S4M_B_5(4YUX)
?
[Raw transfer]



S4M_B_4(4YUV)
?
[Raw transfer]



AAT_F_6(1JQ3)
SPEE_THEMA
[Raw transfer]



AG3_A_9(2E5W)
SPEE_PYRHO
[Raw transfer]



S4M_C_7(2PT6)
?
[Raw transfer]



JA2_A_4(4CWA)
?
[Raw transfer]



S4M_A_4(2PT6)
?
[Raw transfer]



4ZY_B_7(4UOE)
?
[Raw transfer]



S4M_A_3(4YUX)
?
[Raw transfer]



S4M_B_6(4YV0)
?
[Raw transfer]



S4M_B_6(4YV1)
?
[Raw transfer]



S4M_B_4(4YV2)
?
[Raw transfer]



S4M_D_9(4YV0)
?
[Raw transfer]



S4M_B_6(2PT6)
?
[Raw transfer]



S4M_B_5(4YUY)
?
[Raw transfer]



S4M_A_5(4YV1)
?
[Raw transfer]



S4M_A_3(4YUY)
?
[Raw transfer]



S4M_A_4(2PT6)
?
[Raw transfer]



SPD_B_5(2PWP)
?
[Raw transfer]



S4M_C_8(4YV1)
?
[Raw transfer]



S4M_A_3(4YV2)
?
[Raw transfer]



4MN_B_6(4BP3)
?
[Raw transfer]



S4M_A_4(2O0L)
SPEE_HUMAN
[Raw transfer]



S4M_A_5(4YUZ)
?
[Raw transfer]



DSH_A_3(3RW9)
SPEE_HUMAN
[Raw transfer]



DSH_B_4(3RW9)
SPEE_HUMAN
[Raw transfer]



1SQ_B_6(4YUY)
?
[Raw transfer]



MTA_B_6(4UOE)
?
[Raw transfer]



MTA_A_4(4BP1)
?
[Raw transfer]



MTA_C_11(2HTE)
?
[Raw transfer]



MTA_B_4(2O05)
SPEE_HUMAN
[Raw transfer]



MTA_A_3(2O05)
SPEE_HUMAN
[Raw transfer]



MTA_A_4(4CXM)
?
[Raw transfer]



S4M_A_3(2O0L)
SPEE_HUMAN
[Raw transfer]



4JT_A_4(4YUX)
?
[Raw transfer]



MTA_A_7(3B7P)
?
[Raw transfer]



MTA_C_9(4BP1)
?
[Raw transfer]



2MH_B_9(2PT9)
?
[Raw transfer]



MTA_B_6(4CXM)
?
[Raw transfer]



MTA_C_9(3B7P)
?
[Raw transfer]



MTA_B_6(4BP1)
?
[Raw transfer]



MTA_C_8(4CXM)
?
[Raw transfer]



MTA_C_10(4UOE)
?
[Raw transfer]



MTA_B_8(3B7P)
?
[Raw transfer]



MTA_A_11(2E5W)
SPEE_PYRHO
[Raw transfer]



MTA_C_12(2E5W)
SPEE_PYRHO
[Raw transfer]



MTA_A_4(4UOE)
?
[Raw transfer]



MTA_A_4(3RIE)
?
[Raw transfer]



MTA_B_7(2O06)
SPEE_HUMAN
[Raw transfer]



MTA_C_11(3RIE)
?
[Raw transfer]



MTA_B_6(2O07)
SPEE_HUMAN
[Raw transfer]



MTA_B_7(3RIE)
?
[Raw transfer]



MTA_B_9(2HTE)
?
[Raw transfer]



MTA_A_5(2O07)
SPEE_HUMAN
[Raw transfer]



MTA_A_5(2O07)
SPEE_HUMAN
[Raw transfer]



MTA_A_7(2HTE)
?
[Raw transfer]



MTA_A_3(3ANX)
SPEE_THET8
[Raw transfer]



MTA_B_4(3ANX)
SPEE_THET8
[Raw transfer]
27 PsiBlast_CBE 95.0260%-118 - C1 -3O4F - SPEE_ECOLI -
25 PsiBlast_CBE 94.5560%-117 - C1 -3O4F - SPEE_ECOLI -
21 PsiBlast_CBE 94.2460%-119 - C1 -3O4F - SPEE_ECOLI -
111 HHSearch 94.1560%-112 - C1 -3O4F - SPEE_ECOLI -
26 PsiBlast_CBE 93.7460%-111 - C1 -3O4F - SPEE_ECOLI -
22 PsiBlast_CBE 93.1260%-111 - C1 -3O4F - SPEE_ECOLI -
24 PsiBlast_CBE 93.0060%-109 - C1 -3O4F - SPEE_ECOLI -
1 PsiBlast_PDB 92.9760%-114 - C1 -3O4F - SPEE_ECOLI -
118 HHSearch 84.1140%-121 - C1 -2B2C - ? -
46 PsiBlast_CBE 83.5738%-106 - C1 -3RIE 6.4 ?
41 PsiBlast_CBE 83.4238%-104 - C1 -4BP3 8.9 ?
40 PsiBlast_CBE 83.3938%-109 - C1 -4CWA - ? -
48 PsiBlast_CBE 83.3138%-103 - C1 -3B7P 6.6 ?
57 PsiBlast_CBE 83.2838%-103 - C1 -2PT9 8.5 ?
54 PsiBlast_CBE 83.1738%-106 - C1 -4UOE 6.6 ?
45 PsiBlast_CBE 83.0738%-102 - C1 -3RIE 6.6 ?
42 PsiBlast_CBE 82.9238%-102 - C1 -4BP3 8.4 ?
47 PsiBlast_CBE 82.7738%-103 - C1 -3B7P 6.7 ?
18 PsiBlast_PDB 82.7038%-102 - C1 -4BP3 8.7 ?
58 PsiBlast_CBE 82.6638%-105 - C1 -2PT9 8.7 ?
17 PsiBlast_PDB 82.5338%-101 - C1 -4BP1 6.3 ?
51 PsiBlast_CBE 82.4838%-102 - C1 -2HTE 6.3 ?
16 PsiBlast_PDB 82.4838%-103 - C1 -3RIE 6.6 ?
20 PsiBlast_PDB 82.4538%-105 - C1 -4CXM 6.5 ?
60 PsiBlast_CBE 82.4338%-102 - C1 -2PT6 8.7 ?
44 PsiBlast_CBE 82.3938%-102 - C1 -4BP1 6.2 ?
75 PsiBlast_CBE 82.3838%-109 - C1 -4YUZ 7.7 ?
61 PsiBlast_CBE 82.3338%-105 - C1 -2PT6 7.8 ?
50 PsiBlast_CBE 82.2938% -98 - C1 -2I7C 9.4 ?
37 PsiBlast_CBE 82.2738%-102 - C1 -4CXM 6.5 ?
38 PsiBlast_CBE 82.2638%-105 - C1 -4CXM 6.4 ?
49 PsiBlast_CBE 82.2238%-101 - C1 -2I7C 9.2 ?
35 PsiBlast_CBE 82.2238%-101 - C1 -2PWP 3.6 ?
56 PsiBlast_CBE 82.2038%-103 - C1 -2PT9 8.6 ?
59 PsiBlast_CBE 82.1838%-100 - C1 -2PT6 9.2 ?
15 PsiBlast_PDB 81.9538%-102 - C1 -3B7P 6.3 ?
53 PsiBlast_CBE 81.9338%-102 - C1 -4UOE 6.2 ?
55 PsiBlast_CBE 81.9138%-102 - C1 -4UOE 6.5 ?
79 PsiBlast_CBE 81.9038% -98 - C1 -4YUX 7.9 ?
36 PsiBlast_CBE 81.8138%-104 - C1 -2PWP 3.3 ?
14 PsiBlast_PDB 81.7538%-101 - C1 -2I7C 9.5 ?
43 PsiBlast_CBE 81.7438%-100 - C1 -4BP1 6.5 ?
72 PsiBlast_CBE 81.7338%-110 - C1 -4YV1 7.9 ?
70 PsiBlast_CBE 81.6838%-109 - C1 -4YV1 7.4 ?
13 PsiBlast_PDB 81.6538%-107 - C1 -2HTE 5.9 ?
81 PsiBlast_CBE 81.4638% -99 - C1 -4YUW 7.9 ?
74 PsiBlast_CBE 81.4638%-100 - C1 -4YV0 7.9 ?
52 PsiBlast_CBE 81.4038%-105 - C1 -2HTE 5.8 ?
31 PsiBlast_CBE 81.4037%-103 - C1 -2O05 6.5 SPEE_HUMAN
6 PsiBlast_PDB 81.4037%-107 - C1 -3RW9 6.9 SPEE_HUMAN
80 PsiBlast_CBE 81.3038% -96 - C1 -4YUW 7.9 ?
28 PsiBlast_CBE 81.1837%-104 - C1 -2O0L 6.6 SPEE_HUMAN
112 HHSearch 81.1537%-112 - C1 -2O07 5.4 SPEE_HUMAN
77 PsiBlast_CBE 80.9938% -97 - C1 -4YUY 8.1 ?
82 PsiBlast_CBE 80.9838% -95 - C1 -4YUV 7.9 ?
117 HHSearch 80.9535%-102 - C1 -2PT6 7.8 ?
71 PsiBlast_CBE 80.9238%-101 - C1 -4YV1 8.2 ?
68 PsiBlast_CBE 80.8638%-108 - C1 -4YV2 7.3 ?
19 PsiBlast_PDB 80.8438% -98 - C1 -4CWA 4.7 ?
2 PsiBlast_PDB 80.7537%-103 - C1 -2O05 6.6 SPEE_HUMAN
5 PsiBlast_PDB 80.7037%-109 - C1 -2O0L 7.2 SPEE_HUMAN
30 PsiBlast_CBE 80.5937%-101 - C1 -2O06 6.1 SPEE_HUMAN
4 PsiBlast_PDB 80.5137%-110 - C1 -2O07 5.4 SPEE_HUMAN
78 PsiBlast_CBE 80.5038% -96 - C1 -4YUX 7.6 ?
29 PsiBlast_CBE 80.3837%-102 - C1 -2O07 6.7 SPEE_HUMAN
76 PsiBlast_CBE 80.3138% -97 - C1 -4YUY 8.1 ?
73 PsiBlast_CBE 80.2438% -98 - C1 -4YV0 7.7 ?
69 PsiBlast_CBE 80.1338%-100 - C1 -4YV1 7.6 ?
32 PsiBlast_CBE 80.0337%-106 - C1 -3RW9 7.1 SPEE_HUMAN
113 HHSearch 79.9735% -96 * C1 *2I7C 9.6 ?
33 PsiBlast_CBE 79.7839%-103 - C1 -1JQ3 8.2 SPEE_THEMA
34 PsiBlast_CBE 79.6239%-103 - C1 -1JQ3 4.0 SPEE_THEMA
67 PsiBlast_CBE 79.6138%-108 - C1 -4YV2 7.7 ?
10 PsiBlast_PDB 79.5639%-102 - C1 -1JQ3 8.2 SPEE_THEMA
66 PsiBlast_CBE 75.5837%-106 - C1 -3ANX 4.1 SPEE_THET8
87 PsiBlast_CBE 74.5334%-102 - C1 -2E5W 6.9 SPEE_PYRHO
89 PsiBlast_CBE 73.3734%-102 - C1 -2E5W 7.1 SPEE_PYRHO
65 PsiBlast_CBE 73.2537% -99 - C1 -3ANX 4.2 SPEE_THET8