@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1777: (2016-02-01 )
MKLKNTLGVVIGSLVAASAMNAFAQGQNSVEIEAFGKRYFTDSVRNMKNADLYGGSIGYFLTDDVELALSYGEYHDVRGTYETGNKKVHGNLTSLDAIYHFGTPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQYGLEKRDNGHQGEWMAGLGVGFNFGGSKAAPAPEPVADVCSDSDNDGVCDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEVEAEAK

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAL_C_13(4G4Z)
OMP38_ACIBA
[Raw transfer]



ALA_C_13(4G4Y)
OMP38_ACIBA
[Raw transfer]



GLY_C_11(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_E_13(3TD3)
OMP38_ACIBA
[Raw transfer]



ALA_B_11(4G4Y)
OMP38_ACIBA
[Raw transfer]



DAL_A_9(4G4Z)
OMP38_ACIBA
[Raw transfer]



DAL_B_11(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_C_11(4G88)
OMP38_ACIBA
[Raw transfer]



GLY_F_14(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_A_9(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_G_15(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_H_16(3TD3)

[Raw transfer]



API_C_11(3TD4)
OMP38_ACIBA
[Raw transfer]



API_G_15(3TD4)
OMP38_ACIBA
[Raw transfer]



ALA_H_23(4G4Y)

[Raw transfer]



DAL_F_19(4G4Z)
OMP38_ACIBA
[Raw transfer]



ALA_E_17(4G4Y)
OMP38_ACIBA
[Raw transfer]



DAL_E_17(4G4Z)
OMP38_ACIBA
[Raw transfer]



GLY_D_12(3TD3)
OMP38_ACIBA
[Raw transfer]



DAL_H_23(4G4Z)

[Raw transfer]



API_D_12(4G88)
OMP38_ACIBA
[Raw transfer]



ALA_F_19(4G4Y)
OMP38_ACIBA
[Raw transfer]



ALA_A_9(4G4Y)
OMP38_ACIBA
[Raw transfer]



API_E_13(3TD4)
OMP38_ACIBA
[Raw transfer]



ALA_G_21(4G4Y)
OMP38_ACIBA
[Raw transfer]



API_G_16(4G88)
OMP38_ACIBA
[Raw transfer]



ALA_D_15(4G4Y)
OMP38_ACIBA
[Raw transfer]



GLY_B_10(3TD3)
OMP38_ACIBA
[Raw transfer]



DAL_D_15(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_A_9(4G88)
OMP38_ACIBA
[Raw transfer]



API_D_12(3TD4)
OMP38_ACIBA
[Raw transfer]



API_H_16(3TD4)

[Raw transfer]



API_E_14(4G88)
OMP38_ACIBA
[Raw transfer]



DAL_G_21(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_F_15(4G88)
OMP38_ACIBA
[Raw transfer]



API_H_18(4G88)

[Raw transfer]



API_A_9(3TD4)
OMP38_ACIBA
[Raw transfer]



API_B_10(4G88)
OMP38_ACIBA
[Raw transfer]



API_B_10(3TD4)
OMP38_ACIBA
[Raw transfer]



API_F_14(3TD4)
OMP38_ACIBA
[Raw transfer]



CHAIN_U_2(2AIZ)
PAL_HAEIN
[Raw transfer]
-
CHAIN_N_14(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_O_15(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_P_16(3TD5)

[Raw transfer]
-
CHAIN_M_13(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_J_10(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_L_12(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_K_11(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_I_9(3TD5)
OMP38_ACIBA
[Raw transfer]
-
1 PsiBlast_PDB 71.48100% -39 - C5 -4RLC - PORF_PSEAE -
86 Fugue 70.0898% -33 - C5 -4RLC - PORF_PSEAE -
6 PsiBlast_PDB 67.9741% -31 - C4 -4G4Z 3.8 OMP38_ACIBA
22 PsiBlast_CBE 67.8741% -31 - C4 -4G88 2.7 OMP38_ACIBA
41 PsiBlast_CBE 67.7541% -31 - C4 -4G4Y 2.8 OMP38_ACIBA
40 PsiBlast_CBE 67.7441% -26 - C4 -4G4Y 3.0 OMP38_ACIBA
45 PsiBlast_CBE 67.6641% -32 - C4 -3TD5 3.9 OMP38_ACIBA
46 PsiBlast_CBE 67.6541% -31 - C4 -3TD5 3.5 OMP38_ACIBA
42 PsiBlast_CBE 67.6341% -32 - C4 -3TD5 4.2
33 PsiBlast_CBE 67.5641% -28 - C4 -4G4Z 3.3 OMP38_ACIBA
5 PsiBlast_PDB 67.5641% -30 - C4 -4G4Y 3.4 OMP38_ACIBA
55 PsiBlast_CBE 67.5441% -30 - C4 -3TD4 2.7 OMP38_ACIBA
4 PsiBlast_PDB 67.4841% -29 - C4 -3TD5 4.4 OMP38_ACIBA
34 PsiBlast_CBE 67.4141% -30 - C4 -4G4Z 3.7 OMP38_ACIBA
35 PsiBlast_CBE 67.3341% -27 - C4 -4G4Y 2.9
7 PsiBlast_PDB 67.2041% -27 - C4 -4G88 2.6 OMP38_ACIBA
27 PsiBlast_CBE 67.0941% -28 - C4 -4G88 3.4 OMP38_ACIBA
37 PsiBlast_CBE 67.0241% -30 - C4 -4G4Y 3.0 OMP38_ACIBA
30 PsiBlast_CBE 66.9741% -29 - C4 -4G4Z 3.7 OMP38_ACIBA
3 PsiBlast_PDB 66.9141% -27 - C4 -3TD4 2.9 OMP38_ACIBA
26 PsiBlast_CBE 66.8941% -26 - C4 -4G88 3.0 OMP38_ACIBA
58 PsiBlast_CBE 66.8741% -28 - C4 -3TD3 2.5 OMP38_ACIBA
51 PsiBlast_CBE 66.8741% -28 - C4 -3TD4 2.8 OMP38_ACIBA
62 PsiBlast_CBE 66.8641% -26 - C4 -3TD3 3.4 OMP38_ACIBA
21 PsiBlast_CBE 66.8341% -28 - C4 -4G88 2.7
28 PsiBlast_CBE 66.8241% -26 - C4 -4G4Z 3.5
49 PsiBlast_CBE 66.6941% -20 - C4 -3TD4 3.0
48 PsiBlast_CBE 66.6541% -26 - C4 -3TD5 5.1 OMP38_ACIBA
57 PsiBlast_CBE 66.5641% -25 - C4 -3TD3 2.7 OMP38_ACIBA
36 PsiBlast_CBE 66.5441% -27 - C4 -4G4Y 2.8 OMP38_ACIBA
2 PsiBlast_PDB 66.5241% -26 - C4 -3TD3 3.4 OMP38_ACIBA
23 PsiBlast_CBE 66.4441% -26 - C4 -4G88 2.6 OMP38_ACIBA
29 PsiBlast_CBE 66.3441% -25 - C4 -4G4Z 5.0 OMP38_ACIBA
25 PsiBlast_CBE 66.2941% -26 - C4 -4G88 3.0 OMP38_ACIBA
50 PsiBlast_CBE 66.1741% -25 - C4 -3TD4 3.0 OMP38_ACIBA
61 PsiBlast_CBE 66.1541% -24 - C4 -3TD3 2.7 OMP38_ACIBA
47 PsiBlast_CBE 66.0141% -25 - C4 -3TD5 4.4 OMP38_ACIBA
43 PsiBlast_CBE 65.9141% -23 - C4 -3TD5 3.5 OMP38_ACIBA
31 PsiBlast_CBE 65.8841% -27 - C4 -4G4Z 3.7 OMP38_ACIBA
38 PsiBlast_CBE 65.8441% -25 - C4 -4G4Y 2.8 OMP38_ACIBA
24 PsiBlast_CBE 65.8141% -25 - C4 -4G88 2.6 OMP38_ACIBA
56 PsiBlast_CBE 65.8041% -22 - C4 -3TD3 3.1
32 PsiBlast_CBE 65.6941% -26 - C4 -4G4Z 2.8 OMP38_ACIBA
39 PsiBlast_CBE 65.6741% -25 - C4 -4G4Y 3.1 OMP38_ACIBA
53 PsiBlast_CBE 65.4441% -25 - C4 -3TD4 3.0 OMP38_ACIBA
60 PsiBlast_CBE 65.1541% -26 - C4 -3TD3 3.0 OMP38_ACIBA
44 PsiBlast_CBE 65.0541% -24 - C4 -3TD5 1.6 OMP38_ACIBA
52 PsiBlast_CBE 64.9941% -25 - C4 -3TD4 4.4 OMP38_ACIBA
54 PsiBlast_CBE 64.8441% -22 - C4 -3TD4 3.2 OMP38_ACIBA
59 PsiBlast_CBE 64.3741% -21 - C4 -3TD3 3.2 OMP38_ACIBA
109 HHSearch 52.9232% -3 - C4 -2AIZ Error PAL_HAEIN