@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1807: (2016-02-01 )
MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLKLPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGGQRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQASCQELFAAPRHPYTRELLNAEPSGAPASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGESGSGKSTLGLAILRLLESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEAEQEQAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALSHQLMVVRHGKVVEQGSAEAVFASPQHPYTQQLLEAAFMAPASAEN

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
28 PsiBlast_CBE 79.0937%-116 - C3 -4U02 - ? -
5 PsiBlast_PDB 78.2037%-114 - C3 -4U00 - ? -
27 PsiBlast_CBE 76.5937%-110 - C3 -4U02 - ? -
6 PsiBlast_PDB 76.5737%-107 - C3 -4U02 - ? -
29 PsiBlast_CBE 75.8037%-108 - C3 -4U02 - ? -
140 Fugue 74.5729%-115 - C3 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 71.5138%-128 - C3 -4FWI - ? -
10 PsiBlast_PDB 70.8436%-125 - C3 -2OUK - ? -
53 PsiBlast_CBE 69.7333%-119 - C3 -1B0U - HISP_SALTY -
38 PsiBlast_CBE 68.5336%-118 - C3 -2OLK 4.2 ?
37 PsiBlast_CBE 68.3336%-120 - C3 -2OLK 4.6 ?
9 PsiBlast_PDB 68.0136%-119 - C3 -2OLK 4.2 ?
35 PsiBlast_CBE 67.9736%-116 - C3 -2OUK - ? -
31 PsiBlast_CBE 67.7636%-117 - C3 -3C41 4.1 ?
30 PsiBlast_CBE 67.7236%-122 - C3 -3C4J 3.2 ?
146 Fugue 67.0634%-111 - C3 -1B0U - HISP_SALTY -
33 PsiBlast_CBE 67.0436%-114 - C3 -2OUK - ? -
142 Fugue 66.7224% -92 - C3 -1OXS - ? -
135 HHSearch 66.6731%-107 - C3 -3TUI - METN_ECOLI -
125 HHSearch 66.6125%-109 - C3 -1OXX - ? -
36 PsiBlast_CBE 66.5836%-119 - C3 -2OLK 4.2 ?
11 PsiBlast_PDB 66.1536%-116 - C3 -2Q0H 3.3 ?
8 PsiBlast_PDB 66.1536%-119 - C3 -2OLJ 4.1 ?
12 PsiBlast_PDB 66.0736%-116 - C3 -3C4J 4.9 ?
32 PsiBlast_CBE 65.6536%-118 - C3 -2Q0H 4.4 ?
13 PsiBlast_PDB 65.5536%-111 - C3 -3C41 4.8 ?
39 PsiBlast_CBE 64.6536%-118 - C3 -2OLJ 3.7 ?