@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1861: (2016-02-02 )
MDGLRLRFRRAYPGFELDIDLALPGRGVTALFGHSGSGKSTCLRCIAGLEKAAEGEVTINGETWQDSRRNLFVAPHRRALGYVFQDANLFRHLTVRRNLAFGLKRIAAAERRVELEQACALLGIEHLLERMPERLSGGEQQRVGIARALLTSPRLLLMDEPLASLDLKRKGEILPYLERLHEELDIPVLYVSHSPDEVARLADHLVLLENGKVRASGPIGETLARVDLPLALDDDAGVVIEGTVSDHDPAYGLLTLVLPGSALQMRVAHAPLAPGKRLRFKVQARDVSLNLRDDAQSSILNRLPVRVLELVDTDTAAHVLVRLDAGGNPLLARITRYSRDQLQLRPGQLLWAQIKSVAVLA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]
103 Fugue 93.1927%-111 - C1 -1Z47 - ? -
24 PsiBlast_CBE 88.2331%-102 - C1 -3D31 - ? -
2 PsiBlast_PDB 87.7331%-102 - C1 -3D31 - ? -
111 HHSearch 87.0430%-109 - C1 -3D31 - ? -
118 HHSearch 86.0327%-104 - C1 -1Z47 - ? -
15 PsiBlast_PDB 85.8432%-113 - C1 -3PUW - MALK_ECOLI -
16 PsiBlast_PDB 85.6832%-114 - C1 -3PUX - MALK_ECOLI -
14 PsiBlast_PDB 85.4832%-114 - C1 -3PUV - MALK_ECOLI -
17 PsiBlast_PDB 85.1432%-112 - C1 -3RLF - MALK_ECOLI -
27 PsiBlast_CBE 84.7232%-115 - C1 -3RLF - MALK_ECOLI -
20 PsiBlast_PDB 84.3332%-111 - C1 -4KI0 - ? -
26 PsiBlast_CBE 84.1932%-112 - C1 -4KI0 - ? -
11 PsiBlast_PDB 83.6632%-114 - C1 -3PUY - MALK_ECOLI -
38 PsiBlast_CBE 83.5232%-107 - C1 -2R6G - MALK_ECOLI (first) -
33 PsiBlast_CBE 83.3032%-112 - C1 -2AWN - MALK_ECOLI -
12 PsiBlast_PDB 83.3032%-109 - C1 -3PUZ - MALK_ECOLI -
19 PsiBlast_PDB 83.2932%-110 - C1 -4KHZ - ? -
37 PsiBlast_CBE 83.2032%-109 - C1 -2R6G - MALK_ECOLI (first) -
28 PsiBlast_CBE 83.1932%-113 - C1 -3PUZ - MALK_ECOLI -
35 PsiBlast_CBE 82.4632%-112 - C1 -1Q12 - MALK_ECOLI -
99 PsiBlast_CBE 61.4232% -91 - C1 -4AYX 4.0 ABCBA_HUMAN
100 PsiBlast_CBE 60.8232% -89 - C1 -4AYT 4.6 ABCBA_HUMAN