@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1865: (2016-02-02 )
MHEQYQAPLPVNSPALPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLERGERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVDD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_8(4R89)
FAN1_PSEAE
[Raw transfer]
-
NACID_I_7(4RI8)
FAN1_HUMAN
[Raw transfer]
-
NACID_D_4(4R8A)
FAN1_PSEAE
[Raw transfer]
-
NACID_D_4(4R8A)
FAN1_PSEAE
[Raw transfer]
-
NACID_F_4(4RI8)
FAN1_HUMAN
[Raw transfer]
-
NACID_F_3(4RIA)
FAN1_HUMAN
[Raw transfer]
-
NACID_L_6(4RIA)
FAN1_HUMAN
[Raw transfer]
-
NACID_I_8(4R8A)
FAN1_PSEAE
[Raw transfer]
-
NACID_W_6(4RI9)
FAN1_HUMAN
[Raw transfer]
-
NACID_U_5(4RIC)
FAN1_HUMAN
[Raw transfer]
-
NACID_D_4(4R89)
FAN1_PSEAE
[Raw transfer]
-
NACID_C_3(4REA)
FAN1_HUMAN
[Raw transfer]
-
NACID_S_3(4RI9)
FAN1_HUMAN
[Raw transfer]
-
NACID_U_4(4RIB)
FAN1_HUMAN
[Raw transfer]
-
42 Fugue 96.96100%-138 - C4 -4R8A 6.6 FAN1_PSEAE
2 PsiBlast_PDB 96.96100%-138 - C4 -4R8A 6.6 FAN1_PSEAE
10 PsiBlast_CBE 96.78100%-138 - C4 -4R8A 6.6 FAN1_PSEAE
11 PsiBlast_CBE 94.02100%-132 - C4 -4R89 6.6 FAN1_PSEAE
1 PsiBlast_PDB 93.85100%-133 - C4 -4R89 6.6 FAN1_PSEAE
43 Fugue 70.0925%-108 - C4 -4RIC - FAN1_HUMAN -
7 PsiBlast_PDB 53.1632%-116 - C4 -4RY3 - FAN1_HUMAN -
17 PsiBlast_CBE 52.9331%-111 - C4 -4REC - FAN1_HUMAN -
14 PsiBlast_CBE 52.3332%-116 - C4 -4RI8 2.7 FAN1_HUMAN
3 PsiBlast_PDB 52.2932%-114 - C4 -4RI8 3.0 FAN1_HUMAN
15 PsiBlast_CBE 52.2332%-116 - C4 -4RI9 3.5 FAN1_HUMAN
20 PsiBlast_CBE 52.2231%-109 - C4 -4REA 2.1 FAN1_HUMAN
9 PsiBlast_PDB 51.8532%-114 - C4 -4RID - FAN1_HUMAN -
8 PsiBlast_PDB 51.8232%-115 - C4 -4RIC 2.5 FAN1_HUMAN
5 PsiBlast_PDB 51.7732%-114 - C4 -4RIA 3.5 FAN1_HUMAN
13 PsiBlast_CBE 51.6032%-115 - C4 -4RIA 3.5 FAN1_HUMAN
6 PsiBlast_PDB 51.5732%-115 - C4 -4RI9 3.5 FAN1_HUMAN
16 PsiBlast_CBE 51.5632%-115 - C4 -4RIC - FAN1_HUMAN -
4 PsiBlast_PDB 51.1932%-110 - C4 -4RIB 2.6 FAN1_HUMAN
12 PsiBlast_CBE 50.5632%-112 - C4 -4RIB - FAN1_HUMAN -