@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1905: (2016-02-02 )
MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_B_10(1VL7)
?
[Raw transfer]



FMN_G_7(1T9M)
?
[Raw transfer]



FMN_G_7(1TY9)
PHZG_PSEFL
[Raw transfer]



FMN_H_8(1T9M)
?
[Raw transfer]



PLP_A_4(1JNW)
PDXH_ECOLI
[Raw transfer]



FMN_H_8(1TY9)
PHZG_PSEFL
[Raw transfer]



FMN_B_6(4HMV)
PHZG_PSEFL
[Raw transfer]



FMN_B_8(4HMT)
PHZG_PSEFL
[Raw transfer]



FMN_B_7(4HMU)
PHZG_PSEFL
[Raw transfer]



FMN_B_4(4HMW)
?
[Raw transfer]



FMN_B_5(4HMX)
?
[Raw transfer]



FMN_B_8(4HMS)
PHZG_PSEFL
[Raw transfer]
20 PsiBlast_CBE 94.16100% -84 - C1 -1T9M 2.9 ?
1 PsiBlast_PDB 93.30100% -84 - C1 -1T9M 3.1 ?
25 PsiBlast_CBE 86.1371% -84 - C1 -4HMS 3.6 PHZG_PSEFL
23 PsiBlast_CBE 86.0571% -81 - C1 -4HMU 8.3 PHZG_PSEFL
24 PsiBlast_CBE 85.8671% -82 - C1 -4HMT 8.5 PHZG_PSEFL
21 PsiBlast_CBE 85.8071% -82 - C1 -1TY9 3.4 PHZG_PSEFL
2 PsiBlast_PDB 85.2271% -85 - C1 -1TY9 2.9 PHZG_PSEFL
22 PsiBlast_CBE 85.1471% -80 - C1 -4HMV 8.2 PHZG_PSEFL
28 PsiBlast_CBE 75.7732%-105 - C1 -1WV4 - PDXH_ECOLI -
27 PsiBlast_CBE 75.4246% -76 - C1 -4HMW 8.0 ?
26 PsiBlast_CBE 74.9146% -73 - C1 -4HMX 8.2 ?
5 PsiBlast_PDB 73.6032%-100 - C1 -1WV4 - PDXH_ECOLI -
4 PsiBlast_PDB 73.2732% -85 - C1 -1G79 - PDXH_ECOLI -
9 PsiBlast_PDB 72.3932% -85 - C1 -1JNW 2.6 PDXH_ECOLI
6 PsiBlast_PDB 72.3832% -85 - C1 -1DNL - PDXH_ECOLI -
33 HHSearch 72.2833% -83 - C1 -1DNL - PDXH_ECOLI -
7 PsiBlast_PDB 72.1632% -82 - C1 -1G77 - PDXH_ECOLI -
8 PsiBlast_PDB 71.9232% -85 - C1 -1G78 - PDXH_ECOLI -
31 HHSearch 70.8732% -81 - C1 -1NRG - PNPO_HUMAN -
3 PsiBlast_PDB 70.8732% -81 - C1 -1G76 - PDXH_ECOLI -