@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2086: (2016-02-04 )
MNTDPLLPGFDYLTLHTSAARLRVAVKGSGPPLLLLHGYPQTHLAWHRIAPRLAEDYSVVLADLRGYGESRALDEEGADYSKAALARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFVSLTVVPILDNWAAVNKVFALNAYHWFLLAQPYDLPERLIGADPEHFLDYTLRRMAQGRDIYHPQALESYRRAFRDPAVRHAMCEDYRAAVGVDADADQADRDAGRRLQCPVQVLWQERPYAAGQHPLEIWKTWAGQVEGAAIGASHMLPEDAPDAVLEHLLGFLASHREALR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOA_A_5(3R3Z)
DEHA_RHOPA
[Raw transfer]



GOA_C_9(3R3Z)
DEHA_RHOPA
[Raw transfer]



GOA_D_11(3R3Z)
DEHA_RHOPA
[Raw transfer]



GOA_B_7(3R3Z)
DEHA_RHOPA
[Raw transfer]



GOL_A_11(4B9E)
?
[Raw transfer]



R3W_A_3(3R3W)
DEHA_RHOPA
[Raw transfer]



BXA_A_3(3R3X)
DEHA_RHOPA
[Raw transfer]



FAH_A_2(4B9E)
?
[Raw transfer]



FAH_A_12(4BAU)
?
[Raw transfer]



FAH_A_16(4BB0)
?
[Raw transfer]



FAH_A_3(3B12)
DEHA_BURSP
[Raw transfer]



FAH_B_5(3B12)
DEHA_BURSP
[Raw transfer]



FAH_A_3(3B12)
DEHA_BURSP
[Raw transfer]



FAH_A_12(4BB0)
?
[Raw transfer]
69 Fugue 96.89100%-108 - C1 -4B9E 3.0 ?
2 PsiBlast_PDB 96.89100%-108 - C1 -4B9E 3.6 ?
1 PsiBlast_PDB 96.65100%-108 - C1 -4B9A - ? -
3 PsiBlast_PDB 95.9899%-110 - C1 -4BAZ - ? -
6 PsiBlast_PDB 95.6599%-108 - C1 -4BAT - ? -
5 PsiBlast_PDB 95.5799%-109 - C1 -4BAU 2.6 ?
4 PsiBlast_PDB 95.3199%-110 - C1 -4BB0 3.6 ?
9 PsiBlast_PDB 76.2145%-101 - C1 -3R3W 2.6 DEHA_RHOPA
22 PsiBlast_CBE 75.4145%-103 - C1 -3R3Z 3.1 DEHA_RHOPA
27 PsiBlast_CBE 75.3845%-105 - C1 -3R40 - DEHA_RHOPA -
26 PsiBlast_CBE 75.3345%-105 - C1 -3R3U - DEHA_RHOPA -
10 PsiBlast_PDB 75.0345%-102 - C1 -3R3X 2.9 DEHA_RHOPA
23 PsiBlast_CBE 74.9945%-102 - C1 -3R3Z 2.8 DEHA_RHOPA
12 PsiBlast_PDB 74.7645%-101 - C1 -3R41 - DEHA_RHOPA -
30 PsiBlast_CBE 74.5745%-101 - C1 -3R3V - DEHA_RHOPA -
8 PsiBlast_PDB 74.5745%-101 - C1 -3R3Z 3.1 DEHA_RHOPA
31 PsiBlast_CBE 74.5345%-103 - C1 -3R41 - DEHA_RHOPA -
24 PsiBlast_CBE 74.4945%-103 - C1 -3R3U - DEHA_RHOPA -
11 PsiBlast_PDB 74.4645%-101 - C1 -3R40 - DEHA_RHOPA -
29 PsiBlast_CBE 74.4145%-104 - C1 -3R3W - DEHA_RHOPA -
21 PsiBlast_CBE 73.7845%-100 - C1 -3R3Z 3.1 DEHA_RHOPA
33 PsiBlast_CBE 68.3939% -91 - C1 -3B12 2.6 DEHA_BURSP
16 PsiBlast_PDB 68.1339% -91 - C1 -3B12 2.9 DEHA_BURSP
49 HHSearch 66.8539% -89 * C1 *3B12 2.9 DEHA_BURSP