@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2113: (2016-02-04 )
MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLPADGSAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGRSDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDGGFRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRLILSYSLALW

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C8E_A_9(2Y0K)
?
[Raw transfer]



C8E_B_24(3SYS)
?
[Raw transfer]



C8E_B_24(2Y2X)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_A_6(4FSP)
?
[Raw transfer]



C8E_A_5(4FT6)
?
[Raw transfer]



C8E_A_13(2QTK)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_A_9(3SYS)
?
[Raw transfer]



C8E_A_8(2QTK)
?
[Raw transfer]



C8E_B_5(2QTK)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_A_9(3SZV)
?
[Raw transfer]



C8E_A_9(2Y0H)
?
[Raw transfer]



C8E_B_9(4FRX)
?
[Raw transfer]



C8E_A_13(3T24)
?
[Raw transfer]



C8E_A_7(2ODJ)
PORD_PSEAE
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]
2 PsiBlast_PDB 95.74100% -46 - C6 -3SZV - ? -
42 HHSearch 94.9798% -46 - C6 -3SZV 2.9 ?
1 PsiBlast_PDB 93.60100% -40 - C6 -2Y0K 2.4 ?
21 PsiBlast_CBE 82.9356% -33 - C6 -3T24 - ? -
3 PsiBlast_PDB 82.8656% -30 - C6 -3T24 - ? -
22 PsiBlast_CBE 82.2656% -33 - C6 -3T24 - ? -
48 HHSearch 82.0950% -33 - C6 -2Y0H 2.9 ?
8 PsiBlast_PDB 80.9749% -33 - C6 -2Y0H - ? -
7 PsiBlast_PDB 80.9749% -33 - C6 -3T0S - ? -
23 PsiBlast_CBE 80.4041% -30 - C6 -4FRX 2.5 ?
18 PsiBlast_PDB 80.3738% -34 - C6 -3SY7 1.8 PORD_PSEAE
6 PsiBlast_PDB 80.2155% -28 - C6 -4FRT - ? -
47 HHSearch 79.9554% -32 * C6 *2Y0L - ? -
11 PsiBlast_PDB 79.6041% -34 - C6 -4FRX - ? -
49 HHSearch 79.0054% -28 - C6 -3T24 2.7 ?
4 PsiBlast_PDB 78.8754% -30 - C6 -2Y0L - ? -
5 PsiBlast_PDB 78.3154% -29 - C6 -3T20 - ? -
10 PsiBlast_PDB 78.1550% -40 - C6 -4FSP 1.7 ?
9 PsiBlast_PDB 76.8250% -26 - C6 -4FT6 2.4 ?
26 PsiBlast_CBE 76.8043% -26 - C6 -2Y2X 4.0 ?
25 PsiBlast_CBE 76.6643% -28 - C6 -3SYS 3.9 ?
45 HHSearch 76.6037% -29 - C6 -3SY7 1.8 PORD_PSEAE
43 HHSearch 76.5843% -32 - C6 -2Y2X 3.0 ?
19 PsiBlast_PDB 75.9137% -32 - C6 -2ODJ 2.0 PORD_PSEAE
15 PsiBlast_PDB 75.5143% -29 - C6 -2Y2X 3.0 ?
13 PsiBlast_PDB 75.2043% -29 - C6 -3SYS 2.8 ?
14 PsiBlast_PDB 73.7743% -27 - C6 -2QTK 2.7 ?
16 PsiBlast_PDB 73.4043% -31 - C6 -3SZD 2.1 ?
17 PsiBlast_PDB 73.2243% -31 - C6 -4FMS 1.9 ?
27 PsiBlast_CBE 73.0443% -27 - C6 -2QTK Error ?
29 PsiBlast_CBE 72.9443% -30 - C6 -4FMS 2.1 ?
28 PsiBlast_CBE 72.8343% -30 - C6 -3SZD 2.4 ?