@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2144: (2016-02-04 )
MPDSQDQTPSAVQTLKASILAKLRYSVGRDPSTACPHDWFEAVALAVRDHIIDHWEEATPQGEAPARKRVYYLSLEFLIGRLLLDNLGNLGLLEETRQALAELGVDLQRIVALEPDAALGNGGLGRLAACFMESMASLDIPAHGYGIRYEHGLFRQVLTDGWQQEQTETWLDFGNPWEFERPEVSYYIDFGGSVQVDSEHSGRAIWRPDERIRAIAYDTPIVGWRRASVNTLRLWRARAEEDLQLDRFNAGDHIGAVVDVVKAESISRVLYPADSTEAGQELRLRQEYFFVSASLQDLLDRHLRHHHDLRSLPEQVAIQLNDTHPAIAVAELMRQLVDVHQLAWPDAWALSVATLSYTNHTLLPEALESWPVALMERLLPRHMQIIYLINAFHIDALRAQDIHDFDLLRSVSLIEEGHGRRVRMGNLAFLGSHQINGVSALHTELMRETVFHDLHRLYPQRISNKTNGVSFRRWLFQANPGLTELLVETLGADLLDTPERRLPDLEEHVEDARLRARFAEQRRQNKTALARLVLDSLGVAIEPEALFDVHIKRIHEYKRQLLNLLHTVALYQEIRNDPTADRVPRVKIFAGKAAASYHQAKLIIKLANDIARTINDDPTVRGLLKLVFLPNYNVSLAEAIIPAADLSEQISTAGLEASGTSNMKFALNGALTIGTLDGANVEMSQRIGLEHMFIFGLSAQQVEQRRQAGELEMGGVIAASPRLEEALEAIRSGLFSADDRSRYEGLVDGLVHDDRFMLCADFEAYWHAQCRVEEVWREPDRWWRSALLNVARIGWFSADRTISEYARDIWKL

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8GP_E_5(2F3U)
PYGM_RABIT
[Raw transfer]




M8P_A_4(4CTN)
PYGM_RABIT
[Raw transfer]




M7C_A_2(4CTO)
PYGM_RABIT
[Raw transfer]




IMK_D_4(1XKX)
PYGM_RABIT
[Raw transfer]




7GP_E_5(2F3S)
PYGM_RABIT
[Raw transfer]




NBX_A_3(2QN9)
PYGM_RABIT
[Raw transfer]




6GP_E_5(2F3Q)
PYGM_RABIT
[Raw transfer]




VMP_A_5(3ZCT)
PYGM_RABIT
[Raw transfer]




C4B_A_4(3BDA)
PYGM_RABIT
[Raw transfer]




T68_A_2(3ZCU)
PYGM_RABIT
[Raw transfer]




HBZ_A_3(2QN7)
PYGM_RABIT
[Raw transfer]




TH1_B_2(1XL1)
PYGM_RABIT
[Raw transfer]




G1P_C_3(3GPB)
PYGM_RABIT
[Raw transfer]




C3B_A_3(3BD8)
PYGM_RABIT
[Raw transfer]




CKB_A_4(3BD7)
PYGM_RABIT
[Raw transfer]




N85_A_3(3ZCV)
PYGM_RABIT
[Raw transfer]




4GP_E_5(2F3P)
PYGM_RABIT
[Raw transfer]




BZD_C_3(1K06)
PYGM_RABIT
[Raw transfer]




62N_A_3(3ZCQ)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FET)
PYGM_RABIT
[Raw transfer]




MIF_A_2(4CTM)
PYGM_RABIT
[Raw transfer]




F85_A_4(3ZCR)
PYGM_RABIT
[Raw transfer]




CR6_C_3(1P4H)
PYGM_RABIT
[Raw transfer]




AZC_C_3(1KTI)
PYGM_RABIT
[Raw transfer]




GL6_C_3(1XC7)
PYGM_RABIT
[Raw transfer]




CGF_C_3(1P4G)
PYGM_RABIT
[Raw transfer]




GLC_A_2(3AMV)
PYGM_RABIT
[Raw transfer]




H2P_C_3(6GPB)
PYGM_RABIT
[Raw transfer]




GPM_C_3(5GPB)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FF5)
PYGM_RABIT
[Raw transfer]




F58_A_3(3ZCP)
PYGM_RABIT
[Raw transfer]




GFP_C_3(4GPB)
PYGM_RABIT
[Raw transfer]




GOL_A_5(1C8L)
PYGM_RABIT
[Raw transfer]




GOL_A_4(2AMV)
PYGM_RABIT
[Raw transfer]




NTF_C_3(1WW3)
PYGM_RABIT
[Raw transfer]




HTP_I_9(1AXR)
PYGM_RABIT
[Raw transfer]




GLC_C_3(1FA9)
PYGL_HUMAN
[Raw transfer]




PLP_A_2(1WV0)
PYGM_RABIT
[Raw transfer]




PLP_E_5(2GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WV1)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WUT)
PYGM_RABIT
[Raw transfer]




PLP_A_2(4YUA)
PYGM_RABIT
[Raw transfer]




PLP_E_5(1GPY)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1WW2)
PYGM_RABIT
[Raw transfer]




PLP_A_6(2GPA)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1P4J)
PYGM_RABIT
[Raw transfer]




PLP_A_3(3AMV)
PYGM_RABIT
[Raw transfer]




PLP_C_3(8GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1C8L)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRI)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1LWN)
PYGM_RABIT
[Raw transfer]




PLP_A_3(2QLL)
PYGL_HUMAN
[Raw transfer]




PLP_A_2(1UZU)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WUY)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1E1Y)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1XL0)
PYGM_RABIT
[Raw transfer]




PLP_A_2(2AMV)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRJ)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1LWO)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1Z62)
PYGM_RABIT
[Raw transfer]




PLP_G_7(1AXR)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1FA9)
PYGL_HUMAN
[Raw transfer]




PLP_A_7(2SKD)
PYGM_RABIT
[Raw transfer]




PLP_A_7(2SKE)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2SKC)
PYGM_RABIT
[Raw transfer]




60 PsiBlast_CBE 95.7646% -93 - C7 -3DDS - PYGL_HUMAN -
59 PsiBlast_CBE 95.6346% -93 - C7 -3DDW - PYGL_HUMAN -
20 PsiBlast_PDB 95.6146% -95 - C7 -2F3Q 5.2 PYGM_RABIT
8 PsiBlast_PDB 95.6046% -96 - C7 -4CTO 6.5 PYGM_RABIT
96 PsiBlast_CBE 95.5846% -94 - C7 -1P4J 3.4 PYGM_RABIT
9 PsiBlast_PDB 95.5246% -95 - C7 -4YUA 4.3 PYGM_RABIT
23 PsiBlast_CBE 95.4846% -95 - C7 -3BD7 6.5 PYGM_RABIT
27 PsiBlast_CBE 95.4746% -95 - C7 -2F3U 5.2 PYGM_RABIT
61 PsiBlast_CBE 95.4446% -93 - C7 -3DDS - PYGL_HUMAN -
63 PsiBlast_CBE 95.4346% -93 - C7 -3DD1 - PYGL_HUMAN -
38 PsiBlast_CBE 95.4246% -92 - C7 -1L5S - PYGL_HUMAN -
28 PsiBlast_CBE 95.4046% -94 - C7 -2F3S 5.5 PYGM_RABIT
6 PsiBlast_PDB 95.3946% -95 - C7 -4CTM 4.4 PYGM_RABIT
21 PsiBlast_CBE 95.3746% -95 - C7 -3BDA 6.1 PYGM_RABIT
89 PsiBlast_CBE 95.3646% -93 - C7 -2GPB 4.0 PYGM_RABIT
58 PsiBlast_CBE 95.3646% -94 - C7 -3DDW - PYGL_HUMAN -
1 PsiBlast_PDB 95.3146% -95 - C7 -3ZCQ 6.6 PYGM_RABIT
5 PsiBlast_PDB 95.2946% -95 - C7 -3ZCV 6.4 PYGM_RABIT
75 PsiBlast_CBE 95.2746% -94 - C7 -4GPB 4.4 PYGM_RABIT
2 PsiBlast_PDB 95.2546% -96 - C7 -3ZCR 7.4 PYGM_RABIT
76 PsiBlast_CBE 95.2046% -95 - C7 -3ZCP 6.0 PYGM_RABIT
74 PsiBlast_CBE 95.1946% -95 - C7 -5GPB 3.9 PYGM_RABIT
54 PsiBlast_CBE 95.1746% -94 - C7 -1LWN 4.6 PYGM_RABIT
15 PsiBlast_PDB 95.1546% -94 - C7 -1XKX 6.1 PYGM_RABIT
68 PsiBlast_CBE 95.1346% -93 - C7 -8GPB 4.4 PYGM_RABIT
12 PsiBlast_PDB 95.1146% -95 - C7 -1E1Y 3.8 PYGM_RABIT
80 PsiBlast_CBE 95.1046% -93 - C7 -2SKC 3.0 PYGM_RABIT
22 PsiBlast_CBE 95.0446% -95 - C7 -3BD8 5.7 PYGM_RABIT
52 PsiBlast_CBE 95.0346% -93 - C7 -3AMV 4.1 PYGM_RABIT
24 PsiBlast_CBE 95.0346% -95 - C7 -2GPA 4.6 PYGM_RABIT
3 PsiBlast_PDB 95.0146% -95 - C7 -3ZCT 6.7 PYGM_RABIT
97 PsiBlast_CBE 95.0046% -93 - C7 -1P4H 4.4 PYGM_RABIT
95 PsiBlast_CBE 94.9946% -93 - C7 -1WUT 4.4 PYGM_RABIT
17 PsiBlast_PDB 94.9946% -94 - C7 -1XL1 6.1 PYGM_RABIT
83 PsiBlast_CBE 94.9746% -92 - C7 -2PRJ 4.3 PYGM_RABIT
98 PsiBlast_CBE 94.9646% -93 - C7 -1P4G 3.8 PYGM_RABIT
18 PsiBlast_PDB 94.9446% -93 - C7 -1Z62 3.7 PYGM_RABIT
53 PsiBlast_CBE 94.9346% -93 - C7 -1LWO 4.5 PYGM_RABIT
16 PsiBlast_PDB 94.9246% -94 - C7 -1XL0 3.3 PYGM_RABIT
14 PsiBlast_PDB 94.9246% -94 - C7 -1XC7 5.0 PYGM_RABIT
93 PsiBlast_CBE 94.8946% -92 - C7 -1WV0 4.2 PYGM_RABIT
25 PsiBlast_CBE 94.8846% -94 - C7 -2FF5 5.3 PYGM_RABIT
13 PsiBlast_PDB 94.8846% -94 - C7 -1UZU 4.0 PYGM_RABIT
91 PsiBlast_CBE 94.8546% -93 - C7 -1WW2 4.1 PYGM_RABIT
99 PsiBlast_CBE 94.8046% -94 * C7 *1KTI 4.8 PYGM_RABIT
77 PsiBlast_CBE 94.7446% -94 - C7 -3GPB 4.2 PYGM_RABIT
26 PsiBlast_CBE 94.7246% -94 - C7 -2FET 5.5 PYGM_RABIT
7 PsiBlast_PDB 94.7246% -95 - C7 -4CTN 8.1 PYGM_RABIT
4 PsiBlast_PDB 94.7246% -95 - C7 -3ZCU 5.9 PYGM_RABIT
19 PsiBlast_PDB 94.7146% -93 - C7 -2F3P 4.6 PYGM_RABIT
90 PsiBlast_CBE 94.6846% -94 - C7 -1WW3 5.0 PYGM_RABIT
11 PsiBlast_PDB 94.6746% -93 - C7 -2AMV 4.7 PYGM_RABIT
92 PsiBlast_CBE 94.6346% -92 - C7 -1WV1 4.1 PYGM_RABIT
94 PsiBlast_CBE 94.6246% -93 - C7 -1WUY 4.2 PYGM_RABIT
32 PsiBlast_CBE 94.6246% -93 - C7 -1GPY 3.6 PYGM_RABIT
78 PsiBlast_CBE 94.5846% -92 - C7 -2SKE 3.1 PYGM_RABIT
55 PsiBlast_CBE 94.5346% -92 - C7 -1C8L 3.8 PYGM_RABIT
82 PsiBlast_CBE 94.4946% -95 - C7 -2QN7 6.4 PYGM_RABIT
79 PsiBlast_CBE 94.4446% -92 - C7 -2SKD 3.1 PYGM_RABIT
35 PsiBlast_CBE 94.3946% -95 - C7 -1FA9 3.3 PYGL_HUMAN
100 PsiBlast_CBE 94.3846% -95 - C7 -1K06 5.5 PYGM_RABIT
81 PsiBlast_CBE 94.3646% -95 - C7 -2QN9 6.3 PYGM_RABIT
84 PsiBlast_CBE 94.2746% -92 - C7 -2PRI 3.3 PYGM_RABIT
73 PsiBlast_CBE 94.1846% -89 - C7 -6GPB 4.2 PYGM_RABIT
33 PsiBlast_CBE 94.0546% -94 - C7 -1AXR 4.1 PYGM_RABIT
34 PsiBlast_CBE 93.3746% -98 - C7 -2QLL 3.0 PYGL_HUMAN