@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2196: (2016-02-05 )
MKTSYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLEI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_X_24(4L62)
?
[Raw transfer]
-
CHAIN_X_24(4L62)
?
[Raw transfer]
-
CHAIN_X_24(4L62)
?
[Raw transfer]
-
CHAIN_X_24(4L62)
?
[Raw transfer]
-
CHAIN_T_20(4L62)
?
[Raw transfer]
-
CHAIN_T_20(4L62)
?
[Raw transfer]
-
CHAIN_T_20(4L62)
?
[Raw transfer]
-
CHAIN_T_20(4L62)
?
[Raw transfer]
-
CHAIN_R_18(4L62)
?
[Raw transfer]
-
CHAIN_R_18(4L62)
?
[Raw transfer]
-
CHAIN_R_18(4L62)
?
[Raw transfer]
-
CHAIN_R_18(4L62)
?
[Raw transfer]
-
CHAIN_V_22(4L62)
?
[Raw transfer]
-
CHAIN_V_22(4L62)
?
[Raw transfer]
-
CHAIN_V_22(4L62)
?
[Raw transfer]
-
CHAIN_V_22(4L62)
?
[Raw transfer]
-
28 PsiBlast_CBE 98.57100%-130 - C1 -4L62 3.9 ?
26 PsiBlast_CBE 98.57100%-126 - C1 -4L62 4.4 ?
24 PsiBlast_CBE 98.39100%-122 - C1 -4L62 3.8 ?
34 PsiBlast_CBE 98.24100%-122 - C1 -4L62 4.3 ?
22 PsiBlast_CBE 98.15100%-125 - C1 -4L62 4.5 ?
2 PsiBlast_PDB 97.51100%-124 - C1 -4L62 3.9 ?
35 PsiBlast_CBE 96.94100%-129 - C1 -4L62 4.7 ?
32 PsiBlast_CBE 96.84100%-119 - C1 -4L62 3.9 ?
29 PsiBlast_CBE 96.71100%-122 - C1 -4L62 4.4 ?
56 HHSearch 96.62100%-121 - C1 -3RD3 - ? -
21 PsiBlast_CBE 96.43100%-123 - C1 -4L62 4.0 ?
1 PsiBlast_PDB 96.12100%-121 * C1 *3RD3 - ? -
27 PsiBlast_CBE 96.01100%-126 - C1 -4L62 4.9 ?
25 PsiBlast_CBE 95.88100%-122 - C1 -4L62 4.6 ?
33 PsiBlast_CBE 95.83100%-121 - C1 -4L62 4.4 ?
30 PsiBlast_CBE 95.79100%-123 - C1 -4L62 4.6 ?
31 PsiBlast_CBE 95.56100%-123 - C1 -4L62 4.8 ?
23 PsiBlast_CBE 95.48100%-118 - C1 -4L62 4.8 ?
59 HHSearch 75.3043%-112 - C1 -3KNW - ? -
3 PsiBlast_PDB 74.4543%-115 - C1 -3KNW - ? -