@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2247: (2016-02-05 )
MSDYEPLRLHVPEPTGRPGCKTDFSYLHLSPAGEVRKPPVDVEPAETSDLAYSLVRVLDDDGHAVGPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPLGDPIARLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGTLIDGRVPSAASMFEDVYAELPEHLRRQRQELGV

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

THW_A_4(2BEW)
ODBA_HUMAN
[Raw transfer]



THV_A_6(2BEU)
ODBA_HUMAN
[Raw transfer]



WWF_A_4(1WCI)
ODBA_HUMAN
[Raw transfer]



THY_A_4(2BEV)
ODBA_HUMAN
[Raw transfer]



TDP_A_5(1OLX)
ODBA_HUMAN
[Raw transfer]



TZD_A_3(2BFF)
ODBA_HUMAN
[Raw transfer]



TDP_A_6(1U5B)
ODBA_HUMAN
[Raw transfer]



TDP_A_5(1QS0)
ODBA_PSEPU
[Raw transfer]



TDP_A_5(1QS0)
ODBA_PSEPU
[Raw transfer]



TDP_A_6(1DTW)
ODBA_HUMAN
[Raw transfer]



TDP_A_7(1X7Z)
ODBA_HUMAN
[Raw transfer]



TDP_A_6(2BFB)
ODBA_HUMAN
[Raw transfer]



TDP_A_6(2BFE)
ODBA_HUMAN
[Raw transfer]



TDP_A_3(1V1M)
ODBA_HUMAN
[Raw transfer]



TZD_A_5(2BFC)
ODBA_HUMAN
[Raw transfer]



TDP_A_5(1OLU)
ODBA_HUMAN
[Raw transfer]



TDP_A_7(1X7Y)
ODBA_HUMAN
[Raw transfer]



TDP_A_10(1V11)
ODBA_HUMAN
[Raw transfer]



TDP_A_7(1X80)
ODBA_HUMAN
[Raw transfer]



TDP_A_9(1V16)
ODBA_HUMAN
[Raw transfer]



TDP_A_7(1X7W)
ODBA_HUMAN
[Raw transfer]



TDP_A_7(1X7X)
ODBA_HUMAN
[Raw transfer]
1 PsiBlast_PDB 95.7079% -85 - C5 -2BP7 - ODBA_PSEPU -
54 HHSearch 95.1779% -85 - C5 -1QS0 5.7 ODBA_PSEPU
2 PsiBlast_PDB 94.2876% -85 - C5 -1QS0 5.7 ODBA_PSEPU
8 PsiBlast_PDB 75.2039% -82 - C5 -2BEU 6.9 ODBA_HUMAN
9 PsiBlast_PDB 74.7639% -82 - C5 -2BEV 7.5 ODBA_HUMAN
10 PsiBlast_PDB 74.7039% -83 - C5 -2BEW 8.3 ODBA_HUMAN
5 PsiBlast_PDB 74.6139% -85 - C5 -1OLX 6.9 ODBA_HUMAN
7 PsiBlast_PDB 74.5339% -83 - C5 -1WCI 7.4 ODBA_HUMAN
15 PsiBlast_PDB 74.4838% -83 - C5 -1X7Z 6.3 ODBA_HUMAN
6 PsiBlast_PDB 74.4739% -83 - C5 -1U5B 7.2 ODBA_HUMAN
11 PsiBlast_PDB 74.2039% -82 - C5 -2BFF 6.6 ODBA_HUMAN
3 PsiBlast_PDB 73.8439% -82 - C5 -2J9F - ODBA_HUMAN -
21 PsiBlast_CBE 73.8339% -84 - C5 -2J9F - ODBA_HUMAN -
4 PsiBlast_PDB 73.6039% -81 - C5 -1DTW 5.1 ODBA_HUMAN
31 PsiBlast_CBE 73.0437% -75 - C5 -1UMB - ODBA_THET8 -
17 PsiBlast_PDB 72.9138% -90 - C5 -1OLU 6.3 ODBA_HUMAN
14 PsiBlast_PDB 72.9138% -89 - C5 -1X7X 6.5 ODBA_HUMAN
57 HHSearch 72.8836% -75 - C5 -1UMD - ODBA_THET8 -
18 PsiBlast_PDB 72.7338% -91 - C5 -1V1R - ODBA_HUMAN -
27 PsiBlast_CBE 72.7137% -75 - C5 -1UMD - ODBA_THET8 -
23 PsiBlast_CBE 72.5138% -87 - C5 -1V11 6.2 ODBA_HUMAN
13 PsiBlast_PDB 72.3138% -89 - C5 -1X7W 6.1 ODBA_HUMAN
20 PsiBlast_PDB 72.2838% -86 - C5 -1V16 5.8 ODBA_HUMAN
16 PsiBlast_PDB 72.1538% -89 - C5 -1X80 6.4 ODBA_HUMAN
22 PsiBlast_CBE 72.1438% -87 - C5 -2BFC 6.1 ODBA_HUMAN
12 PsiBlast_PDB 72.0938% -88 - C5 -1X7Y 6.3 ODBA_HUMAN
25 PsiBlast_CBE 72.0538% -86 - C5 -1V1M 5.8 ODBA_HUMAN
19 PsiBlast_PDB 71.8438% -87 - C5 -2BFB 6.5 ODBA_HUMAN
24 PsiBlast_CBE 71.8038% -87 - C5 -2BFE 5.8 ODBA_HUMAN