@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2294: (2016-02-06 )
MTTAGNSLGRIQIRDLSIRLGQGSEAFEAVRDLNLEARPGEFVCLLGPSGCGKSTLLGALAGHLRPSAGSVRVDGRSVEGPSPQRGMVFQQHTLFPWRRVRDNVAFGLKMQGLARAERNRRAMEMLGLVGLADFAGRWPGQLSGGMQQRVEIARVLVNRPRLLLMDEPFGALDAQTRLKMQTLLLDVWARVRTTVLFVTHDIDEALYLADRVLVMSPRPGRIIADLALDFPRPRDTRLVTSADFVRLKRHCLELLDHDDGRQLPRLTPLGLPPGITPDRLRIAI

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




63 PsiBlast_CBE 88.6336%-126 - C1 -4U02 - ? -
65 PsiBlast_CBE 86.5136%-121 - C1 -4U02 - ? -
66 PsiBlast_CBE 86.1736%-125 - C1 -4U00 - ? -
62 PsiBlast_CBE 85.6136%-120 - C1 -4U02 - ? -
22 PsiBlast_CBE 84.4840%-133 - C1 -2IT1 - ? -
2 PsiBlast_PDB 83.6840%-129 - C1 -2IT1 - ? -
64 PsiBlast_CBE 83.2736%-123 - C1 -4U02 - ? -
97 PsiBlast_CBE 80.0432%-108 - C1 -4HLU - ECFA2_THEMA -
6 PsiBlast_PDB 80.0438%-142 - C1 -1V43 - ? -
113 HHSearch 79.7439%-121 - C1 -2IT1 - ? -
39 PsiBlast_CBE 79.6837%-118 - C1 -1L2T - Y796_METJA -
107 Fugue 79.0733%-105 - C1 -1Z47 - ? -
98 PsiBlast_CBE 78.2032%-108 - C1 -4HLU - ECFA2_THEMA -
3 PsiBlast_PDB 78.0138%-141 - C1 -1VCI - ? -
53 PsiBlast_CBE 77.7936%-121 - C1 -3TIF - Y796_METJA -
83 PsiBlast_CBE 77.3935%-119 - C1 -2OUK - ? -
115 HHSearch 77.3337%-127 - C1 -1V43 - ? -
52 PsiBlast_CBE 76.8938%-120 - C1 -3FVQ - FBPC_NEIG1 -
51 PsiBlast_CBE 76.5938%-122 - C1 -3FVQ - FBPC_NEIG1 -
117 HHSearch 76.5738%-127 - C1 -2YYZ - ? -
74 PsiBlast_CBE 76.5535%-119 - C1 -3C4J 4.1 ?
85 PsiBlast_CBE 74.6635%-114 - C1 -2OLK 4.4 ?
86 PsiBlast_CBE 74.3835%-111 - C1 -2OLK 4.3 ?
79 PsiBlast_CBE 73.5935%-114 - C1 -2Q0H 3.6 ?
87 PsiBlast_CBE 73.5335%-114 - C1 -2OLK 4.1 ?
84 PsiBlast_CBE 73.4535%-113 - C1 -2OLK 4.2 ?
77 PsiBlast_CBE 73.1535%-113 - C1 -3C41 5.3 ?
68 PsiBlast_CBE 71.7931%-109 - C1 -4MKI 2.2 ECFA2_CALS4
89 PsiBlast_CBE 71.6435%-119 - C1 -2OLJ 4.0 ?
76 PsiBlast_CBE 71.1035%-113 - C1 -3C41 4.0 ?
75 PsiBlast_CBE 70.7435%-115 - C1 -3C4J 5.0 ?
88 PsiBlast_CBE 69.9135%-113 - C1 -2OLJ 3.7 ?
78 PsiBlast_CBE 68.6435%-114 - C1 -2Q0H 3.8 ?
93 PsiBlast_CBE 54.7933%-117 - C1 -4YMV 3.5 ?
95 PsiBlast_CBE 53.7233%-121 - C1 -4YMU 4.2 ?
92 PsiBlast_CBE 52.8933%-118 - C1 -4YMV 5.0 ?
94 PsiBlast_CBE 52.2133%-121 - C1 -4YMU 4.6 ?