@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2382: (2016-02-07 )
MSVITDIEDLRRLARKRVPRMFYDYADSGSWSEGTYRANQDDFAAIKLRQRVARNIENRSLRTRMLGQEMAMPVAIAPTGLAGMQHADGEILAARAAAEFGVRYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIDRAKAAGCDALVLTLDLQIIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFGNIVGHVKGVDDMGSLSEWTARQFDPRLNWGDVEWIKRRWGGKLVLKGILDAEDARLAADSGADALVVSNHGGRQLDGAPSTISALPAIVEAVGERIEVWLDSGIRSGQDVLKAIALGARGTMIGRPYLYGLGALGQAGVTRALEIIARELDLTMAFCGHTDIREVGRDILLPGSYPR

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_I_9(1GOX)
GOX_SPIOL
[Raw transfer]



FMN_I_9(1GOX)
GOX_SPIOL
[Raw transfer]



DHP_I_9(1AL8)
GOX_SPIOL
[Raw transfer]



FMN_E_5(1AL7)
GOX_SPIOL
[Raw transfer]



173_I_9(1SZE)
CYB2_YEAST
[Raw transfer]



173_K_11(1SZE)
CYB2_YEAST
[Raw transfer]



FMN_G_7(1SZF)
CYB2_YEAST
[Raw transfer]



3IL_M_13(2A7P)
GOX_SPIOL
[Raw transfer]



FMN_E_5(1AL8)
GOX_SPIOL
[Raw transfer]



FMN_A_2(3GIY)
MDLB_PSEPU
[Raw transfer]



FMN_I_9(1P4C)
GOX_SPIOL
[Raw transfer]



FMN_E_5(1SZE)
CYB2_YEAST
[Raw transfer]



FMN_I_9(1P4C)
GOX_SPIOL
[Raw transfer]



FMN_E_5(2A7N)
GOX_SPIOL
[Raw transfer]



FMN_E_5(2A85)
GOX_SPIOL
[Raw transfer]



FMN_A_2(2RDU)
HAOX1_HUMAN
[Raw transfer]



EDO_B_6(1KBJ)
CYB2_YEAST
[Raw transfer]



FMN_E_5(1SZF)
CYB2_YEAST
[Raw transfer]



FMN_E_5(2A7P)
GOX_SPIOL
[Raw transfer]



FMN_B_6(1KBI)
CYB2_YEAST
[Raw transfer]



FMN_A_5(1KBI)
CYB2_YEAST
[Raw transfer]



FMN_I_9(1P5B)
GOX_SPIOL
[Raw transfer]



FMN_A_2(2RDT)
HAOX1_HUMAN
[Raw transfer]



FMN_A_3(2RDW)
HAOX1_HUMAN
[Raw transfer]



FMN_A_5(1KBI)
CYB2_YEAST
[Raw transfer]



FMN_B_5(1FCB)
CYB2_YEAST
[Raw transfer]



LAC_B_7(2NLI)
?
[Raw transfer]



FMN_B_5(1KBJ)
CYB2_YEAST
[Raw transfer]



FMN_A_4(1FCB)
CYB2_YEAST
[Raw transfer]



LAC_A_4(2NLI)
?
[Raw transfer]



FMN_A_3(1KBJ)
CYB2_YEAST
[Raw transfer]



FMN_F_6(1HUV)
GOX_SPIOL
[Raw transfer]



FMN_G_7(1SZE)
CYB2_YEAST
[Raw transfer]



LAC_A_4(2NLI)
?
[Raw transfer]



EDO_A_4(1KBJ)
CYB2_YEAST
[Raw transfer]



EDO_B_6(2ZFA)
?
[Raw transfer]



EDO_A_4(2ZFA)
?
[Raw transfer]
136 HHSearch 96.5539% -96 - C2 -1GOX 10.3 GOX_SPIOL
1 PsiBlast_PDB 94.6638% -96 - C2 -1GOX 10.3 GOX_SPIOL
5 PsiBlast_PDB 94.2435%-100 - C2 -2RDU 10.7 HAOX1_HUMAN
2 PsiBlast_PDB 94.1038% -96 - C2 -1AL7 9.4 GOX_SPIOL
6 PsiBlast_PDB 93.9535%-100 - C2 -2RDW 9.9 HAOX1_HUMAN
135 HHSearch 93.6237% -98 - C2 -1P4C 10.5 GOX_SPIOL
14 PsiBlast_PDB 92.9536%-100 - C2 -3GIY 10.6 MDLB_PSEPU
11 PsiBlast_PDB 92.8636%-100 - C2 -2A7N 10.7 GOX_SPIOL
3 PsiBlast_PDB 92.8438%-104 - C2 -1AL8 10.0 GOX_SPIOL
9 PsiBlast_PDB 92.8336% -98 - C2 -1P4C 10.5 GOX_SPIOL
12 PsiBlast_PDB 92.5736%-100 - C2 -2A7P 10.5 GOX_SPIOL (first)
10 PsiBlast_PDB 92.4836% -99 - C2 -1P5B 10.6 GOX_SPIOL (first)
8 PsiBlast_PDB 92.2336%-103 - C2 -1HUV 9.6 GOX_SPIOL (first)
7 PsiBlast_PDB 92.2135%-105 - C2 -2W0U - HAOX1_HUMAN -
21 PsiBlast_CBE 92.1935%-106 - C2 -2W0U - HAOX1_HUMAN -
13 PsiBlast_PDB 92.0036% -96 - C2 -2A85 10.0 GOX_SPIOL
23 PsiBlast_CBE 91.9935%-105 - C2 -2W0U - HAOX1_HUMAN -
4 PsiBlast_PDB 91.9535%-106 - C2 -2RDT 10.2 HAOX1_HUMAN
49 PsiBlast_CBE 90.8131% -90 - C2 -4YL2 - ? -
53 PsiBlast_CBE 90.6431% -90 - C2 -2J6X - ? -
139 HHSearch 90.1132%-100 - C2 -1KBI 10.6 CYB2_YEAST
36 PsiBlast_CBE 88.7531% -99 - C2 -1KBI 10.4 CYB2_YEAST
37 PsiBlast_CBE 88.6831%-100 - C2 -1KBI 10.6 CYB2_YEAST
138 HHSearch 88.4032% -96 - C2 -2NLI 4.2 ?
40 PsiBlast_CBE 87.7931% -99 - C2 -1KBJ 10.9 CYB2_YEAST
38 PsiBlast_CBE 87.6331%-100 - C2 -1FCB 9.7 CYB2_YEAST
17 PsiBlast_PDB 87.5231% -97 - C2 -1SZF 10.3 CYB2_YEAST
34 PsiBlast_CBE 87.3631% -98 - C2 -1SZF 10.1 CYB2_YEAST
39 PsiBlast_CBE 87.1731% -99 - C2 -1KBJ 10.8 CYB2_YEAST
42 PsiBlast_CBE 86.9331% -97 - C2 -1SZE 10.1 CYB2_YEAST
20 PsiBlast_PDB 86.6131%-100 - C2 -1FCB 10.2 CYB2_YEAST
41 PsiBlast_CBE 86.2031% -96 - C2 -1SZE 8.3 CYB2_YEAST
59 PsiBlast_CBE 86.1231% -89 - C2 -2ZFA 2.2 ?
57 PsiBlast_CBE 85.4231% -94 - C2 -2NLI 4.1 ?
58 PsiBlast_CBE 83.4531% -97 - C2 -2ZFA 3.5 ?
56 PsiBlast_CBE 83.3231% -98 - C2 -2NLI 2.9 ?