@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2481: (2016-02-08 )
MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEC_A_3(4WQ9)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQD)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQD)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQC)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQA)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQB)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQ8)
TSDA_ALLVD
[Raw transfer]




EDO_A_6(4WQA)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQE)
TSDA_ALLVD
[Raw transfer]




EDO_A_6(4WQ9)
TSDA_ALLVD
[Raw transfer]




HEC_A_3(4WQ7)
TSDA_ALLVD
[Raw transfer]




GAI_A_6(4WQD)
TSDA_ALLVD
[Raw transfer]




21 PsiBlast_CBE 92.2940% -57 - C4 -4WQ9 8.2 TSDA_ALLVD
4 PsiBlast_PDB 92.1239% -58 - C4 -4WQB 8.4 TSDA_ALLVD
22 PsiBlast_CBE 92.1040% -59 - C4 -4WQD 6.4 TSDA_ALLVD
23 PsiBlast_CBE 91.5640% -58 - C4 -4WQ8 5.6 TSDA_ALLVD
1 PsiBlast_PDB 91.5240% -56 - C4 -4WQC 7.0 TSDA_ALLVD
70 Fugue 91.3640% -54 - C4 -4WQD 6.3 TSDA_ALLVD
2 PsiBlast_PDB 91.2740% -55 - C4 -4WQ7 4.9 TSDA_ALLVD
3 PsiBlast_PDB 90.6339% -55 - C4 -4WQA 5.7 TSDA_ALLVD
5 PsiBlast_PDB 90.2239% -56 - C4 -4WQE 5.0 TSDA_ALLVD
55 HHSearch 56.1920% -56 - C4 -2VHD - CCPR_PSEAE -
49 HHSearch 53.9820% -71 - C4 -3MK7 - CCOP1_PSEST -
72 Fugue 53.4322% -43 - C4 -2XTS - ? -
56 HHSearch 51.9418% -48 - C4 -3O5C - ? -
16 PsiBlast_PDB 47.9623% -36 - C4 -1H1O - CY552_ACIFR -
7 PsiBlast_PDB 46.5226% -94 - C4 -2XTS - ? -
52 HHSearch 46.4315% -50 - C4 -1IQC - CCPR_NITEU -
78 Fugue 44.7120% -37 - C1 -2XBG - YC48L_THEEB -
62 HHSearch 44.5625% -56 - C4 -2XTS - ? -
77 Fugue 43.0815% -27 - C2 -2JFV - ? -
53 HHSearch 42.6020% -43 - C4 -1H1O - CY552_ACIFR -