@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2507: (2016-02-08 )
MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGRDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MCT_A_4(3HJS)
CATA_RHOOP
[Raw transfer]




CAQ_A_5(1DLT)
CATA_ACIAD
[Raw transfer]




CAQ_A_5(3HHY)
CATA_RHOOP
[Raw transfer]




CAQ_B_7(1DLT)
CATA_ACIAD
[Raw transfer]




CAQ_A_5(3HHY)
CATA_RHOOP
[Raw transfer]




MCT_B_7(1DMH)
CATA_ACIAD
[Raw transfer]




BEZ_A_5(3HGI)
CATA_RHOOP
[Raw transfer]




PYG_B_8(3O6R)
CLCA_RHOOP
[Raw transfer]




MCT_A_5(1DMH)
CATA_ACIAD
[Raw transfer]




PYG_A_6(3O6R)
CLCA_RHOOP
[Raw transfer]




MCT_A_5(1DMH)
CATA_ACIAD
[Raw transfer]




MCT_A_5(1DMH)
CATA_ACIAD
[Raw transfer]




DHB_A_3(3HKP)
CATA_RHOOP
[Raw transfer]




BEZ_B_9(1S9A)
CLCA_RHOOP
[Raw transfer]




MBD_A_4(3HJQ)
CATA_RHOOP
[Raw transfer]




HQN_A_5(3O6J)
CLCA_RHOOP
[Raw transfer]




PYG_A_4(3HHX)
CATA_RHOOP
[Raw transfer]




4CL_A_3(3HJ8)
CATA_RHOOP
[Raw transfer]




3CE_A_3(3I4V)
CATA_RHOOP
[Raw transfer]




45C_A_3(3I51)
CATA_RHOOP
[Raw transfer]




35C_A_3(3I4Y)
CATA_RHOOP
[Raw transfer]




DHB_A_6(3O5U)
CLCA_RHOOP
[Raw transfer]




DTD_A_5(3TH1)
CLCA_PSEPU
[Raw transfer]




1 PsiBlast_PDB 94.0775% -64 - C9 -2AZQ - ? -
161 HHSearch 92.9973% -64 - C9 -2AZQ - ? -
181 Fugue 90.5255% -58 - C9 -1DMH 3.2 CATA_ACIAD
24 PsiBlast_CBE 89.7955% -56 - C9 -1DLM - CATA_ACIAD -
3 PsiBlast_PDB 89.7055% -55 - C9 -1DLQ - CATA_ACIAD -
162 HHSearch 89.5856% -60 - C9 -1DMH 3.2 CATA_ACIAD
23 PsiBlast_CBE 89.4255% -56 - C9 -1DLQ - CATA_ACIAD -
5 PsiBlast_PDB 89.2855% -58 - C9 -1DMH 3.2 CATA_ACIAD
4 PsiBlast_PDB 88.9955% -58 - C9 -1DLT 3.3 CATA_ACIAD
2 PsiBlast_PDB 88.7755% -56 - C9 -1DLM - CATA_ACIAD -
21 PsiBlast_CBE 88.4655% -57 - C9 -1DMH 3.4 CATA_ACIAD
22 PsiBlast_CBE 88.0955% -54 - C9 -1DLT 3.1 CATA_ACIAD
7 PsiBlast_PDB 85.4352% -62 - C9 -2XSV - ? -
6 PsiBlast_PDB 85.1052% -62 - C9 -2XSU - ? -
8 PsiBlast_PDB 84.4852% -62 - C9 -2XSR - ? -
163 HHSearch 82.5549% -59 - C9 -2XSU - ? -
164 HHSearch 72.9429% -58 - C9 -1TMX - CHQB_NOCSI -
167 HHSearch 72.7232% -66 - C9 -3O5U 2.9 CLCA_RHOOP
28 PsiBlast_CBE 72.6432% -72 - C9 -3O6J 3.0 CLCA_RHOOP
30 PsiBlast_CBE 72.3632% -66 - C9 -3O5U - CLCA_RHOOP -
33 PsiBlast_CBE 71.4932% -68 - C9 -1S9A 3.8 CLCA_RHOOP
165 HHSearch 71.4431% -64 - C9 -3HHY 3.2 CATA_RHOOP
26 PsiBlast_CBE 70.6432% -64 - C9 -3O6R 2.6 CLCA_RHOOP
25 PsiBlast_CBE 70.6432% -71 - C9 -3O6R 3.2 CLCA_RHOOP
14 PsiBlast_PDB 64.4437% -58 - C9 -3HJQ 3.4 CATA_RHOOP
18 PsiBlast_PDB 63.8837% -56 - C9 -3I4Y 4.1 CATA_RHOOP
17 PsiBlast_PDB 63.7637% -56 - C9 -3HHX 2.6 CATA_RHOOP
13 PsiBlast_PDB 63.6137% -56 - C9 -3HJ8 2.8 CATA_RHOOP
20 PsiBlast_PDB 63.5237% -53 - C9 -3HKP 3.5 CATA_RHOOP
11 PsiBlast_PDB 63.3337% -53 - C9 -3HGI 3.1 CATA_RHOOP
12 PsiBlast_PDB 63.0237% -53 - C9 -3HHY 2.7 CATA_RHOOP
15 PsiBlast_PDB 62.9037% -53 - C9 -3HJS 3.0 CATA_RHOOP
169 HHSearch 62.8530% -56 - C9 -3TH1 3.3 CLCA_PSEPU
19 PsiBlast_PDB 62.5337% -56 - C9 -3I51 3.4 CATA_RHOOP
16 PsiBlast_PDB 62.4637% -63 - C9 -3I4V 3.4 CATA_RHOOP