@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2666: (2016-02-10 )
MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZSP_E_20(4NTK)
QUED_ECOLI
[Raw transfer]



ZSP_A_8(4NTK)
QUED_ECOLI
[Raw transfer]



ZSP_B_11(4NTK)
QUED_ECOLI
[Raw transfer]



ZSP_C_14(4NTK)
QUED_ECOLI
[Raw transfer]



2K8_B_10(4NTM)
QUED_ECOLI
[Raw transfer]



ZSP_F_23(4NTK)
QUED_ECOLI
[Raw transfer]



2K8_E_16(4NTM)
QUED_ECOLI
[Raw transfer]



BIO_A_7(3QNA)
QUED_ECOLI
[Raw transfer]



ZSP_D_17(4NTK)
QUED_ECOLI
[Raw transfer]



BIO_D_13(3QNA)
QUED_ECOLI
[Raw transfer]



BIO_F_17(3QNA)
QUED_ECOLI
[Raw transfer]



2K8_A_8(4NTM)
QUED_ECOLI
[Raw transfer]



2K8_C_12(4NTM)
QUED_ECOLI
[Raw transfer]



BIO_C_11(3QNA)
QUED_ECOLI
[Raw transfer]



2K8_F_18(4NTM)
QUED_ECOLI
[Raw transfer]



2K8_D_14(4NTM)
QUED_ECOLI
[Raw transfer]



BIO_E_15(3QNA)
QUED_ECOLI
[Raw transfer]



BIO_B_9(3QNA)
QUED_ECOLI
[Raw transfer]



BIO_A_5(1B66)
PTPS_RAT
[Raw transfer]



BIO_A_5(1B66)
PTPS_RAT
[Raw transfer]
1 PsiBlast_PDB 96.55100%-147 - C6 -2OBA - ? -
24 PsiBlast_CBE 96.11100%-148 - C6 -2OBA - ? -
23 PsiBlast_CBE 96.11100%-140 - C6 -2OBA - ? -
22 PsiBlast_CBE 95.91100%-148 - C6 -2OBA - ? -
25 PsiBlast_CBE 95.47100%-145 - C6 -2OBA - ? -
21 PsiBlast_CBE 95.43100%-140 - C6 -2OBA - ? -
39 PsiBlast_CBE 90.6275%-141 - C6 -3QNA 4.0 QUED_ECOLI
7 PsiBlast_PDB 90.0975%-145 - C6 -3QNA 4.2 QUED_ECOLI
33 PsiBlast_CBE 89.6275%-141 - C6 -4NTK 4.3 QUED_ECOLI
44 PsiBlast_CBE 89.5476%-143 - C6 -4NTN - QUED_ECOLI -
47 PsiBlast_CBE 89.2476%-138 - C6 -4NTM 3.3 QUED_ECOLI
37 PsiBlast_CBE 89.1275%-138 - C6 -3QNA 4.0 QUED_ECOLI
45 PsiBlast_CBE 89.0276%-147 - C6 -4NTN - QUED_ECOLI -
27 PsiBlast_CBE 88.8876%-131 - C6 -3QN0 - QUED_ECOLI -
40 PsiBlast_CBE 88.8275%-140 - C6 -3QNA 4.1 QUED_ECOLI
2 PsiBlast_PDB 88.6476%-137 - C6 -3QN0 - QUED_ECOLI -
35 PsiBlast_CBE 88.5875%-135 - C6 -4NTK 4.3 QUED_ECOLI
6 PsiBlast_PDB 88.5875%-137 - C6 -4NTK 4.4 QUED_ECOLI
41 PsiBlast_CBE 88.5775%-138 - C6 -3QNA 3.7 QUED_ECOLI
29 PsiBlast_CBE 88.3876%-137 - C6 -3QN0 - QUED_ECOLI -
38 PsiBlast_CBE 88.1575%-140 - C6 -3QNA 4.4 QUED_ECOLI
32 PsiBlast_CBE 87.9575%-131 - C6 -4NTK 4.5 QUED_ECOLI
49 PsiBlast_CBE 87.7976%-145 - C6 -4NTM 3.3 QUED_ECOLI
34 PsiBlast_CBE 87.6775%-137 - C6 -4NTK 4.2 QUED_ECOLI
51 PsiBlast_CBE 87.5576%-135 - C6 -4NTM 3.0 QUED_ECOLI
36 PsiBlast_CBE 87.4075%-144 - C6 -4NTK 4.6 QUED_ECOLI
48 PsiBlast_CBE 86.9476%-142 - C6 -4NTM 3.5 QUED_ECOLI
4 PsiBlast_PDB 86.8376%-151 - C6 -4NTM 3.3 QUED_ECOLI
50 PsiBlast_CBE 86.7476%-146 - C6 -4NTM 3.2 QUED_ECOLI
87 Fugue 73.7035%-131 * C6 *1B66 5.0 PTPS_RAT
68 HHSearch 69.5336%-115 - C6 -1B66 5.0 PTPS_RAT