@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2857: (2016-02-11 )
MSASILNAQNLSKVVGSAEGKLTILHDLSLDLARGDSLAIVGSSGSGKSTLLGLLAGLDQPSGGEVRLAGHALGDLDEDQRARVRAAHVGFVFQSFQLLDSLDALENVMLPLELEGRADARQRARELLERVGLGQRLGHYPRQLSGGEQQRVAIARAFAAEPDVLFADEPTGNLDSATGERISDLLFELNRERGTTLVLVTHDERLAHRCRRLIRLESGRLIDRVEP

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_3(4FWI)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ATP_D_15(2IXF)

[Raw transfer]



ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]



ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



IPA_A_5(3TIF)
Y796_METJA
[Raw transfer]
116 HHSearch 92.5345%-105 - C1 -2PCJ - LOLD_AQUAE -
21 PsiBlast_CBE 91.6544%-103 - C1 -2PCJ - LOLD_AQUAE -
122 Fugue 91.2338%-106 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 91.1944%-100 - C1 -2PCL - LOLD_AQUAE -
1 PsiBlast_PDB 90.7244%-103 - C1 -2PCJ - LOLD_AQUAE -
118 HHSearch 90.3143% -98 - C1 -3TIF 2.5 Y796_METJA
5 PsiBlast_PDB 89.8343%-101 - C1 -3TIF - Y796_METJA -
23 PsiBlast_CBE 89.6443%-107 - C1 -3TIF - Y796_METJA -
22 PsiBlast_CBE 89.5143%-106 - C1 -1L2T - Y796_METJA -
3 PsiBlast_PDB 88.6143%-102 - C1 -1L2T - Y796_METJA -
4 PsiBlast_PDB 88.5645%-102 - C1 -1F3O - Y796_METJA -
8 PsiBlast_PDB 87.6438%-110 - C1 -3TUZ - METN_ECOLI -
27 PsiBlast_CBE 86.9538%-112 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 86.2438%-110 - C1 -3TUZ - METN_ECOLI -
32 PsiBlast_CBE 85.4739%-108 - C1 -4U02 - ? -
28 PsiBlast_CBE 85.4138%-110 - C1 -3TUI - METN_ECOLI -
7 PsiBlast_PDB 84.9938%-106 - C1 -3TUI - METN_ECOLI -
86 PsiBlast_CBE 84.9738%-101 - C1 -1B0U 5.1 HISP_SALTY
25 PsiBlast_CBE 84.5738%-107 - C1 -3TUZ - METN_ECOLI -
12 PsiBlast_PDB 84.2739% -97 - C1 -4U02 - ? -
81 PsiBlast_CBE 81.4435%-105 - C1 -2OLJ 4.5 ?
78 PsiBlast_CBE 80.8235%-101 - C1 -2OLK 4.6 ?
77 PsiBlast_CBE 80.4335%-101 - C1 -2OLK 5.2 ?
76 PsiBlast_CBE 80.1935% -99 - C1 -2OLK 4.5 ?
79 PsiBlast_CBE 79.4535%-101 - C1 -2OLK 5.1 ?
68 PsiBlast_CBE 79.4035%-103 - C1 -3C4J 4.4 ?
66 PsiBlast_CBE 78.9935% -97 - C1 -3C41 4.7 ?
69 PsiBlast_CBE 78.5735%-101 - C1 -3C4J 5.5 ?
71 PsiBlast_CBE 78.0835% -98 - C1 -2Q0H 5.5 ?
70 PsiBlast_CBE 77.3335% -98 - C1 -2Q0H 4.9 ?
67 PsiBlast_CBE 77.1635% -92 - C1 -3C41 4.9 ?
80 PsiBlast_CBE 76.4335% -94 - C1 -2OLJ 4.4 ?
87 PsiBlast_CBE 72.0836%-102 - C1 -3FVQ 6.3 FBPC_NEIG1
88 PsiBlast_CBE 70.4736%-101 - C1 -3FVQ 5.8 FBPC_NEIG1
96 PsiBlast_CBE 69.3234%-102 - C1 -4FWI 5.1 ?
100 PsiBlast_CBE 55.1832% -76 - C1 -2IXF 6.1 TAP1_RAT
82 PsiBlast_CBE 54.0333% -97 - C1 -1VCI 3.5 ?
99 PsiBlast_CBE 52.4132% -78 - C1 -2IXF 6.3
97 PsiBlast_CBE 51.8435%-104 - C1 -4HLU 4.0 ECFA1_THEMA
98 PsiBlast_CBE 51.2035%-103 - C1 -4HLU 4.5 ECFA1_THEMA