@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2862: (2016-02-11 )
MKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQIPPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQGIPTSACGEGAYKVNGVSYYSWSGSSPLTNFLDPSDAFLGASSLTFKNGTANDGLVGTCSSHLGMVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OCP_A_3(1EX9)
LIP_PSEAE
[Raw transfer]



OCP_A_3(1EX9)
LIP_PSEAE
[Raw transfer]



OCP_A_3(1EX9)
LIP_PSEAE
[Raw transfer]



2HS_X_3(1YS2)
LIP_BURCE
[Raw transfer]



INK_A_3(1HQD)
LIP_BURCE
[Raw transfer]



INK_A_3(1HQD)
LIP_BURCE
[Raw transfer]



2HR_X_3(1YS1)
LIP_BURCE
[Raw transfer]



2HR_X_3(1YS1)
LIP_BURCE
[Raw transfer]



POT_A_4(2NW6)
LIP_BURCE
[Raw transfer]



CCP_E_6(4LIP)
LIP_BURCE
[Raw transfer]



CCP_D_5(4LIP)
LIP_BURCE
[Raw transfer]



DEP_A_3(4GXN)
?
[Raw transfer]



PE4_A_6(4HS9)
?
[Raw transfer]



IPA_A_4(4GW3)
?
[Raw transfer]



PG4_A_5(3OOS)
?
[Raw transfer]
28 Fugue 87.79100% -52 - C1 -1EX9 5.4 LIP_PSEAE
1 PsiBlast_PDB 87.79100% -52 - C1 -1EX9 5.4 LIP_PSEAE
39 HHSearch 87.59100% -52 * C1 *1EX9 5.4 LIP_PSEAE
3 PsiBlast_PDB 76.3140% -58 - C1 -4GW3 3.5 ?
5 PsiBlast_PDB 75.5841% -57 - C1 -3W9U - ? -
4 PsiBlast_PDB 75.4840% -59 - C1 -4GXN 3.1 ?
29 Fugue 74.3943% -56 - C1 -3W9U - ? -
2 PsiBlast_PDB 73.8541% -56 - C1 -4HS9 2.8 ?
23 PsiBlast_CBE 73.5339% -54 - C1 -2ES4 - LIP_BURGL -
24 PsiBlast_CBE 72.8739% -51 - C1 -1TAH - ? -
15 PsiBlast_PDB 72.4439% -53 - C1 -2ES4 - LIP_BURGL -
25 PsiBlast_CBE 72.3939% -52 - C1 -1TAH - ? -
16 PsiBlast_PDB 71.8639% -52 - C1 -1CVL - LIP_BURGL -
26 PsiBlast_CBE 71.1039% -50 - C1 -1TAH - ? -
17 PsiBlast_PDB 70.8439% -51 - C1 -1TAH - ? -
6 PsiBlast_PDB 70.8341% -48 - C1 -1YS1 4.1 LIP_BURCE
14 PsiBlast_PDB 70.7941% -46 - C1 -2NW6 3.4 LIP_BURCE
10 PsiBlast_PDB 70.5641% -47 - C1 -1HQD 3.2 LIP_BURCE
22 PsiBlast_CBE 70.5241% -46 - C1 -1OIL - LIP_BURCE -
11 PsiBlast_PDB 70.3141% -44 - C1 -2LIP - LIP_BURCE -
9 PsiBlast_PDB 70.3041% -47 - C1 -4LIP 2.5 LIP_BURCE
21 PsiBlast_CBE 70.1041% -45 - C1 -4LIP 2.5 LIP_BURCE
7 PsiBlast_PDB 69.9441% -48 - C1 -1YS2 4.5 LIP_BURCE
38 HHSearch 68.3842% -44 - C1 -1YS1 4.6 LIP_BURCE
30 Fugue 66.3840% -45 - C1 -1HQD 3.1 LIP_BURCE