@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2891: (2016-02-11 )
MPSFNKILVANRGEIACRVLRTAHELGYRSVAVYSEADADTRHVQLADEAVCIGPAAVAQSYLNLEAILDAARRSGAEAIHPGYGFLSENAEFARACEAAGIVFIGPDAEAIHLMGSKRLSKIAMLAAGVPCIPGYEGAEQDDATLRREAERIGYPLMIKASAGGGGRGMRLVEEPGQLLEQLRTARSEALGAFGSAELILERAVLRPRHVEIQVFGDRHGNLLYLGERDCSVQRRHQKVIEEAPCPVLDADLRRAMGEAAVKAAASVNYVGAGTVEFLLGEDGRFYFLEMNTRLQVEHPVTELVTGQDLVAWQIRIAEGHPLPLRQEQVELRGHAIEVRLYAEDAGRGFLPQTGTVLRWDPELLPGVRIDHGLVEGQAVTPFYDPMLAKLIAYGATRDEARRKLIRALERCVLLGVDGNQRFLANLLAHPDFAAGEATTAFIGERFAEDPSLQPRQPGAEELALAAALLYQAGAEASAHQPGLAGWRSAAGAPWKIVLKHAEQRLEIGLEVLESGRRPRLLARLERREIAVRLLDCDGRWASAELDGIRRRHAYHLDGGRLWLYGHGGNLELLDVTHAGASAQVGASSGTLKAPMDGAIVEVLVGEGERVGKGQLLLVLEAMKMEHPLKAGVDGVVRRVQVGRGEQVRNRQVLVEVEADA

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 92.7751% -94 - C2 -3U9S - ? -
2 PsiBlast_PDB 89.7951% -90 - C2 -3U9T - ? -
117 HHSearch 87.0352% -85 - C2 -3U9T - ? -
107 Fugue 86.6950% -87 - C2 -3U9T - ? -
109 Fugue 85.8533% -69 - C2 -3VA7 2.1 ?
35 PsiBlast_CBE 84.1450% -88 - C2 -2W71 6.6 ACCC_ECOLI
41 PsiBlast_CBE 83.1650% -87 - C2 -2W6Q 4.2 ACCC_ECOLI
38 PsiBlast_CBE 83.1350% -86 - C2 -2W70 3.8 ACCC_ECOLI
48 PsiBlast_CBE 83.0850% -88 - C2 -2V58 5.8 ACCC_ECOLI
55 PsiBlast_CBE 82.9850% -87 - C2 -3G8D 5.2 ACCC_ECOLI
39 PsiBlast_CBE 82.9350% -89 - C2 -2W6Z - ACCC_ECOLI -
54 PsiBlast_CBE 82.8750% -86 - C2 -3RV4 8.2 ACCC_ECOLI
37 PsiBlast_CBE 82.8650% -88 - C2 -2W70 3.6 ACCC_ECOLI
15 PsiBlast_PDB 82.8650% -85 - C2 -2V5A 6.2 ACCC_ECOLI
47 PsiBlast_CBE 82.7750% -87 - C2 -2V59 5.2 ACCC_ECOLI
58 PsiBlast_CBE 82.7448% -84 - C2 -2VQD 7.5 ACCC_PSEAE
36 PsiBlast_CBE 82.7450% -87 - C2 -2W71 6.6 ACCC_ECOLI
13 PsiBlast_PDB 82.7050% -85 - C2 -2V58 6.2 ACCC_ECOLI
46 PsiBlast_CBE 82.6850% -87 - C2 -2V5A - ACCC_ECOLI -
44 PsiBlast_CBE 82.6650% -88 - C2 -2W6M 3.3 ACCC_ECOLI
18 PsiBlast_PDB 82.6250% -88 - C2 -2W6O 3.7 ACCC_ECOLI
26 PsiBlast_CBE 82.6148% -88 - C2 -2VPQ 5.4 ?
14 PsiBlast_PDB 82.5950% -85 - C2 -2V59 5.0 ACCC_ECOLI
6 PsiBlast_PDB 82.5849% -86 - C2 -3JZI 8.3 ACCC_ECOLI
43 PsiBlast_CBE 82.5550% -87 - C2 -2W6N 4.7 ACCC_ECOLI
40 PsiBlast_CBE 82.5150% -85 - C2 -2W6Z 4.3 ACCC_ECOLI
125 HHSearch 82.4645% -89 - C2 -3OUZ 6.0 ?
42 PsiBlast_CBE 82.4250% -88 - C2 -2W6O 3.4 ACCC_ECOLI
20 PsiBlast_PDB 82.2750% -85 - C2 -2W6Q 4.0 ACCC_ECOLI
4 PsiBlast_PDB 82.2748% -88 - C2 -2VPQ 6.5 ?
19 PsiBlast_PDB 82.2350% -86 - C2 -2W6P 5.0 ACCC_ECOLI
16 PsiBlast_PDB 82.2250% -85 - C2 -2W6M 3.3 ACCC_ECOLI
11 PsiBlast_PDB 82.2150% -87 - C2 -2J9G 5.9 ACCC_ECOLI
8 PsiBlast_PDB 82.2050% -86 - C2 -3RV3 7.2 ACCC_ECOLI
28 PsiBlast_CBE 82.1749% -83 - C2 -3JZF 9.1 ACCC_ECOLI
27 PsiBlast_CBE 82.1549% -84 - C2 -3JZI 8.8 ACCC_ECOLI
51 PsiBlast_CBE 82.1250% -86 - C2 -3G8C 6.2 ACCC_ECOLI
12 PsiBlast_PDB 82.1250% -90 - C2 -2VR1 4.1 ACCC_ECOLI
7 PsiBlast_PDB 82.1150% -84 - C2 -3RUP 7.1 ACCC_ECOLI
17 PsiBlast_PDB 82.0950% -87 - C2 -2W6N 4.6 ACCC_ECOLI
50 PsiBlast_CBE 82.0350% -85 - C2 -3G8C 6.4 ACCC_ECOLI
29 PsiBlast_CBE 81.9550% -87 - C2 -3RV3 6.3 ACCC_ECOLI
30 PsiBlast_CBE 81.5050% -86 - C2 -3RUP 6.8 ACCC_ECOLI
53 PsiBlast_CBE 81.4350% -86 - C2 -1DV2 5.7 ACCC_ECOLI
52 PsiBlast_CBE 81.3150% -83 - C2 -1DV2 4.1 ACCC_ECOLI
49 PsiBlast_CBE 81.2850% -88 - C2 -2J9G 6.0 ACCC_ECOLI
123 HHSearch 80.9947% -84 - C2 -2VPQ 6.5 ?
57 PsiBlast_CBE 78.2250% -93 - C2 -4RZQ 3.8 ACCC_HAEIN
99 PsiBlast_CBE 73.7939% -94 - C2 -3VA7 2.1 ?
122 HHSearch 72.6840% -92 * C2 *3VA7 2.1 ?