@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2912: (2016-02-12 )
MSSLHLDALHWSPDASTELLRGVHLEVPAGSFVGLIGPNGSGKTSLLRCAFRYARPQRGRVVLDGDDLWRQPPRWAARRIAVVLQEFPEDFGLAVEDVVAMGRTPHKGLFDGHGADDRQRVRQALLQVGLEGRAASPFASLSGGEKQRALLARALVQEPRLLILDEPTNHLDPRYQLELLRLLRSLGLSTLASFHDLNLAAAFCDRLYVLDGGRIVAQGTPTEVLDADLLWRVFGVRALVDRHPLADHPRLTWITQA

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_B_5(4P32)
LPTB_ECOLI
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




GOL_A_5(4P33)
LPTB_ECOLI
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




1 PsiBlast_PDB 94.2239%-128 - C1 -4G1U - HMUV_YERPE -
21 PsiBlast_CBE 93.7639%-128 - C1 -4G1U - HMUV_YERPE -
86 HHSearch 78.3930%-114 - C1 -3GFO - ECFA3_CLOP1 -
2 PsiBlast_PDB 77.8730%-116 - C1 -3GFO - ECFA3_CLOP1 -
43 PsiBlast_CBE 74.7032%-117 - C1 -4P33 2.9 LPTB_ECOLI
40 PsiBlast_CBE 74.3033%-118 - C1 -4QC2 - ? -
44 PsiBlast_CBE 72.9532%-119 - C1 -4P33 2.9 LPTB_ECOLI
64 PsiBlast_CBE 72.3333%-120 - C1 -3FVQ 5.9 FBPC_NEIG1
42 PsiBlast_CBE 72.2233%-114 - C1 -4P32 5.3 LPTB_ECOLI
39 PsiBlast_CBE 71.4133%-118 - C1 -4QC2 - ? -
93 HHSearch 71.3730%-128 - C1 -2NQ2 - Y1470_HAEIN -
32 PsiBlast_CBE 71.3734%-119 - C1 -4U02 - ? -
12 PsiBlast_PDB 71.0834%-116 - C1 -4U02 - ? -
78 HHSearch 71.0331%-104 - C1 -2IT1 - ? -
31 PsiBlast_CBE 70.8334%-122 - C1 -4U02 - ? -
41 PsiBlast_CBE 70.7333%-115 - C1 -4P32 4.7 LPTB_ECOLI
11 PsiBlast_PDB 70.5834%-121 - C1 -4U00 4.6 ?
81 HHSearch 70.4032%-115 * C1 *3TUI - METN_ECOLI -
74 HHSearch 70.3632%-109 - C1 -1Z47 - ? -
65 PsiBlast_CBE 69.9533%-116 - C1 -3FVQ 5.9 FBPC_NEIG1
62 PsiBlast_CBE 69.8631%-117 - C1 -1L2T 4.5 Y796_METJA
71 PsiBlast_CBE 68.2031%-115 - C1 -3TIF 3.9 Y796_METJA
63 PsiBlast_CBE 67.6931%-116 - C1 -1L2T 4.3 Y796_METJA
70 PsiBlast_CBE 66.7831%-116 - C1 -3TIF 4.4 Y796_METJA
14 PsiBlast_PDB 65.5530%-115 - C1 -2OLJ 4.4 ?
23 PsiBlast_CBE 64.4232%-116 - C1 -4YMU 5.7 ?
6 PsiBlast_PDB 64.3532%-113 - C1 -4YMU 4.8 ?
22 PsiBlast_CBE 63.9032%-116 - C1 -4YMV 4.1 ?
7 PsiBlast_PDB 63.5332%-115 - C1 -4YMV 4.5 ?
17 PsiBlast_PDB 63.2430%-109 - C1 -2Q0H 3.3 ?
15 PsiBlast_PDB 62.9230%-111 - C1 -2OLK 3.5 ?
19 PsiBlast_PDB 62.0830%-110 - C1 -3C41 4.7 ?
36 PsiBlast_CBE 62.0332%-122 - C1 -1VCI 2.8 ?
18 PsiBlast_PDB 59.9830%-108 - C1 -3C4J 4.7 ?
72 PsiBlast_CBE 43.2134%-105 - C1 -4HLU 5.6 ECFA1_THEMA
73 PsiBlast_CBE 42.5834%-105 - C1 -4HLU 5.3 ECFA1_THEMA