@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2934: (2016-02-12 )
MILDRLCRGLLAGIALTFSLGGFAAEEFPVPNGFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHSSNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGHGGMGTFQLEQMKAYADDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_D_8(4DMK)
?
[Raw transfer]



GOL_A_5(4DMH)
?
[Raw transfer]



0PZ_B_6(4EHB)
?
[Raw transfer]



GOL_A_5(4DMK)
?
[Raw transfer]



0PZ_A_5(4EHB)
?
[Raw transfer]



0PZ_D_8(4EHB)
?
[Raw transfer]



GOL_C_7(4DMK)
?
[Raw transfer]



GOL_B_6(4DMK)
?
[Raw transfer]



GOL_D_8(4DMH)
?
[Raw transfer]



GOL_B_6(4DMH)
?
[Raw transfer]



GOL_C_7(4DMH)
?
[Raw transfer]



0RE_D_6(4EUS)
?
[Raw transfer]



0PZ_C_7(4EHB)
?
[Raw transfer]



HE2_B_6(4DNO)
?
[Raw transfer]



HE2_D_8(4DNO)
?
[Raw transfer]



HE2_C_7(4DNO)
?
[Raw transfer]



0RE_B_5(4EUS)
?
[Raw transfer]



HE2_A_5(4DNO)
?
[Raw transfer]



EBH_B_6(4DNF)
?
[Raw transfer]



EBH_D_8(4DNF)
?
[Raw transfer]



EBH_A_5(4DNF)
?
[Raw transfer]



EBH_C_7(4DNF)
?
[Raw transfer]



4HY_B_6(4YX9)
?
[Raw transfer]



4HY_D_8(4YX9)
?
[Raw transfer]



4HY_A_5(4YX9)
?
[Raw transfer]



4HY_C_7(4YX9)
?
[Raw transfer]
26 PsiBlast_CBE 97.8698%-113 - C1 -4DNO 3.0 ?
22 PsiBlast_CBE 97.7799%-110 - C1 -4YX9 5.9 ?
9 PsiBlast_PDB 97.7498%-109 - C1 -4DLN - ? -
8 PsiBlast_PDB 97.7198%-111 - C1 -4DMK 2.4 ?
39 PsiBlast_CBE 97.6898%-109 - C1 -4DMH 2.9 ?
33 PsiBlast_CBE 97.5898%-109 - C1 -4DMK 2.4 ?
34 PsiBlast_CBE 97.5698%-112 - C1 -4DMK 3.5 ?
7 PsiBlast_PDB 97.4998%-110 - C1 -4DM7 - ? -
11 PsiBlast_PDB 97.3398%-110 - C1 -3PI6 - ? -
35 PsiBlast_CBE 97.2198%-111 - C1 -4EHB 2.5 ?
10 PsiBlast_PDB 97.1998%-109 - C1 -4EHB 3.6 ?
32 PsiBlast_CBE 97.1598%-112 - C1 -4DMK 2.5 ?
30 PsiBlast_CBE 97.1598%-110 - C1 -4DNF 3.5 ?
5 PsiBlast_PDB 97.1198%-110 - C1 -4DNF 3.5 ?
37 PsiBlast_CBE 97.0798%-111 - C1 -4EHB 3.6 ?
28 PsiBlast_CBE 96.8998%-112 - C1 -4DNO 3.0 ?
4 PsiBlast_PDB 96.8798%-110 - C1 -4DMC - ? -
12 PsiBlast_PDB 96.8398%-110 - C1 -3KDA - ? -
38 PsiBlast_CBE 96.8198%-110 - C1 -4DMH 2.8 ?
24 PsiBlast_CBE 96.7599%-114 - C1 -4EUS 2.9 ?
3 PsiBlast_PDB 96.6899%-110 - C1 -4YX9 5.8 ?
14 PsiBlast_PDB 96.5798%-107 - C1 -4DMH 2.8 ?
29 PsiBlast_CBE 96.5198%-108 - C1 -4DNF 3.4 ?
40 PsiBlast_CBE 96.4798%-110 - C1 -4DMH 2.8 ?
6 PsiBlast_PDB 96.3798%-111 - C1 -4DNO 3.0 ?
25 PsiBlast_CBE 96.3299%-111 - C1 -4EUS 2.8 ?
21 PsiBlast_CBE 96.3199%-111 - C1 -4YX9 7.0 ?
23 PsiBlast_CBE 96.2799%-113 - C1 -4YX9 6.8 ?
36 PsiBlast_CBE 95.9498%-108 - C1 -4EHB 3.1 ?
31 PsiBlast_CBE 95.9498%-109 - C1 -4DNF 3.5 ?
27 PsiBlast_CBE 95.8898%-109 - C1 -4DNO 2.9 ?