@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2965: (2016-02-12 )
MSRRRVVITGMGMLSPLGLDVPSSWEGILAGRSGIAPIEHMDLSAYSTRFGGSVKGFNVEEYLSAKEARKLDLFIQYGLAASFQAVRDSGLEVTDANRERIGVSMGSGIGGLTNIENNCRSLFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYALTTACTTGTHSIGMAARNIAYGEADVMVAGGSEMAACGLGLGGFGAARALSTRNDEPTRASRPWDRDRDGFVLSDGSGALVLEELEHARARGARIYAELVGFGMSGDAFHMTAPPEDGAGAARCMKNALRDAGLDPRQVDYINAHGTSTPAGDIAEIAAVKSVFGEHAHALSMSSTKSMTGHLLGAAGAVEAIFSVLALRDQVAPPTINLDNPDEGCDLDLVAHEAKPRKIDVALSNSFGFGGTNGTLVFRRFAD

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

840_A_2(3I8P)
FABF_ECOLI
[Raw transfer]




PMN_A_2(3HNZ)
FABF_ECOLI
[Raw transfer]




PMN_C_3(2GFX)
FABF_ECOLI
[Raw transfer]




N3A_A_2(3HO9)
FABF_ECOLI
[Raw transfer]




P9A_A_2(3G0Y)
FABF_ECOLI
[Raw transfer]




1X9_A_6(4LS7)
FABF_BACSU
[Raw transfer]




P9C_A_2(3G11)
FABF_ECOLI
[Raw transfer]




N32_A_2(3HO2)
FABF_ECOLI
[Raw transfer]




1X9_B_10(4LS7)
FABF_BACSU
[Raw transfer]




CER_A_3(1B3N)
FABF_ECOLI
[Raw transfer]




1XG_A_3(4LS8)
FABF_BACSU
[Raw transfer]




1XG_B_10(4LS8)
FABF_BACSU
[Raw transfer]




GOL_B_9(4LS6)
FABF_BACSU
[Raw transfer]




GOL_B_10(4LS5)
FABF_BACSU
[Raw transfer]




TLG_A_4(4C6V)
?
[Raw transfer]




TLG_A_6(4C6U)
?
[Raw transfer]




TLM_A_9(2WGE)
FAB1_MYCTU
[Raw transfer]




TLG_B_25(4C72)
?
[Raw transfer]




TLG_A_15(4C72)
?
[Raw transfer]




TLH_A_13(4C73)
?
[Raw transfer]




7RD_B_15(4C71)
?
[Raw transfer]




TLH_B_23(4C73)
?
[Raw transfer]




6NA_A_3(2IWZ)
OXSM_HUMAN
[Raw transfer]




6NA_B_5(2IWZ)
OXSM_HUMAN
[Raw transfer]




6NA_B_5(2IX4)
KASM_ARATH
[Raw transfer]




6NA_A_3(2IX4)
KASM_ARATH
[Raw transfer]




DAO_C_3(2GFY)
FABF_ECOLI
[Raw transfer]




EDO_A_7(4C6U)
?
[Raw transfer]




IPA_A_5(2WGD)
FAB1_MYCTU
[Raw transfer]




EDO_A_5(3KZU)
?
[Raw transfer]




EDO_A_4(3KZU)
?
[Raw transfer]




EDO_A_5(3KZU)
?
[Raw transfer]




3MQ_A_5(3MQD)
?
[Raw transfer]




21 PsiBlast_CBE 99.38100% -85 - C3 -4B7V - ? -
2 PsiBlast_PDB 99.12100% -85 - C3 -4JPF - ? -
1 PsiBlast_PDB 98.86100% -84 - C3 -4B7V - ? -
3 PsiBlast_PDB 98.0799% -81 - C3 -4JB6 - ? -
22 PsiBlast_CBE 97.7599% -81 - C3 -4JB6 - ? -
5 PsiBlast_PDB 87.4564% -81 - C3 -4JRM - FABF_VIBCH -
23 PsiBlast_CBE 87.2464% -82 - C3 -4JRM - FABF_VIBCH -
8 PsiBlast_PDB 87.1566% -79 - C3 -2GFW - FABF_ECOLI -
25 PsiBlast_CBE 87.1164% -82 - C3 -4JRH - FABF_VIBCH -
17 PsiBlast_PDB 87.0666% -78 - C3 -3G11 7.0 FABF_ECOLI
4 PsiBlast_PDB 86.9564% -82 - C3 -4JRH - FABF_VIBCH -
24 PsiBlast_CBE 86.7864% -81 - C3 -4JRM - FABF_VIBCH -
7 PsiBlast_PDB 86.6966% -78 - C3 -1KAS - FABF_ECOLI -
13 PsiBlast_PDB 86.5266% -77 - C3 -3I8P 6.1 FABF_ECOLI
12 PsiBlast_PDB 86.5166% -76 - C3 -3HO9 6.3 FABF_ECOLI
19 PsiBlast_PDB 86.4254% -76 - C3 -4LS5 - FABF_BACSU -
26 PsiBlast_CBE 86.4159% -75 - C3 -4QAV - ? -
32 PsiBlast_CBE 86.4054% -76 - C3 -4LS6 - FABF_BACSU -
11 PsiBlast_PDB 86.4066% -76 - C3 -3HO2 6.1 FABF_ECOLI
20 PsiBlast_PDB 86.1654% -76 - C3 -4LS7 4.5 FABF_BACSU
6 PsiBlast_PDB 86.1166% -78 - C3 -1B3N 3.3 FABF_ECOLI
30 PsiBlast_CBE 85.8654% -77 - C3 -4LS5 2.9 FABF_BACSU
16 PsiBlast_PDB 85.8466% -77 - C3 -3G0Y 6.9 FABF_ECOLI
15 PsiBlast_PDB 85.7566% -78 - C3 -2GFX 6.3 FABF_ECOLI
9 PsiBlast_PDB 85.7366% -75 - C3 -2GFY 3.0 FABF_ECOLI
29 PsiBlast_CBE 85.6754% -76 - C3 -4LS7 4.8 FABF_BACSU
106 HHSearch 85.6556% -76 - C3 -3KZU 2.9 ?
27 PsiBlast_CBE 85.5154% -77 - C3 -4LS8 3.7 FABF_BACSU
28 PsiBlast_CBE 85.5054% -77 - C3 -4LS8 3.7 FABF_BACSU
31 PsiBlast_CBE 85.4154% -76 - C3 -4LS6 2.9 FABF_BACSU
10 PsiBlast_PDB 84.5866% -73 - C3 -3HNZ 6.6 FABF_ECOLI
39 PsiBlast_CBE 84.4555% -77 - C3 -3KZU 2.9 ?
38 PsiBlast_CBE 83.1655% -75 - C3 -3KZU 3.0 ?
47 PsiBlast_CBE 80.7747% -74 - C3 -2IWZ 3.8 OXSM_HUMAN
46 PsiBlast_CBE 79.9147% -72 - C3 -2IWZ 2.7 OXSM_HUMAN
42 PsiBlast_CBE 77.8949% -70 - C3 -2IX4 2.1 KASM_ARATH
43 PsiBlast_CBE 77.4649% -68 - C3 -2IX4 2.0 KASM_ARATH
62 PsiBlast_CBE 74.8438% -68 - C3 -3MQD 1.7 ?
58 PsiBlast_CBE 69.8239% -62 - C3 -2WGD 2.5 FAB1_MYCTU
57 PsiBlast_CBE 69.5139% -61 - C3 -2WGE 4.0 FAB1_MYCTU
60 PsiBlast_CBE 69.1839% -58 - C3 -4C6U 4.4 ?
83 PsiBlast_CBE 69.1439% -60 - C3 -4C72 5.2 ?
59 PsiBlast_CBE 69.1239% -60 - C3 -4C6V 4.9 ?
82 PsiBlast_CBE 69.0839% -59 - C3 -4C73 5.4 ?
84 PsiBlast_CBE 69.0639% -60 - C3 -4C72 5.3 ?
85 PsiBlast_CBE 68.8639% -61 - C3 -4C71 5.7 ?
81 PsiBlast_CBE 68.5939% -59 - C3 -4C73 5.4 ?