@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2977: (2016-02-12 )
MSLELQEHCSLKPYNTFGIDVRARLLAHARDEADVREALALARERGLPLLVIGGGSNLLLTRDVEALVLRMASQGRRIVSDAADSVLVEAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQACRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPVRQRLEEEGIASPTARDVSRVICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNLY

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPU_C_3(2MBR)
MURB_ECOLI
[Raw transfer]




EPU_C_3(1UXY)
MURB_ECOLI
[Raw transfer]




EEB_B_2(1MBB)
MURB_ECOLI
[Raw transfer]




NAP_A_3(4JB1)
MURB_PSEAE
[Raw transfer]




FAD_C_3(1MBT)
MURB_ECOLI
[Raw transfer]




FAD_B_2(1UXY)
MURB_ECOLI
[Raw transfer]




FAD_C_3(1MBB)
MURB_ECOLI
[Raw transfer]




FAD_B_2(1UXY)
MURB_ECOLI
[Raw transfer]




FAD_A_3(2Q85)
MURB_ECOLI
[Raw transfer]




FAD_B_2(2MBR)
MURB_ECOLI
[Raw transfer]




FAD_A_2(3I99)
MURB_VIBCH
[Raw transfer]




FAD_A_2(3I99)
MURB_VIBCH
[Raw transfer]




GOL_A_3(3TX1)
MURB_LISMO
[Raw transfer]




FAD_B_2(1UXY)
?
[Raw transfer]




GOL_A_4(3TX1)
MURB_LISMO
[Raw transfer]




FAD_B_2(1UXY)
?
[Raw transfer]




973_A_2(2Q85)
MURB_ECOLI
[Raw transfer]




21 PsiBlast_CBE 99.85100%-108 - C4 -4JAY - MURB_PSEAE -
1 PsiBlast_PDB 99.57100%-108 - C4 -4JAY - MURB_PSEAE -
23 PsiBlast_CBE 99.22100%-108 - C4 -4JAY - MURB_PSEAE -
22 PsiBlast_CBE 99.01100%-109 - C4 -4JAY - MURB_PSEAE -
2 PsiBlast_PDB 98.43100%-108 - C4 -4JB1 8.7 MURB_PSEAE
3 PsiBlast_PDB 79.5845%-102 - C4 -2Q85 12.9 MURB_ECOLI
5 PsiBlast_PDB 79.0745%-104 - C4 -1MBT 12.8 MURB_ECOLI
6 PsiBlast_PDB 78.5445%-101 - C4 -2MBR 13.6 MURB_ECOLI
7 PsiBlast_PDB 78.4644%-100 - C4 -1UXY 13.8 MURB_ECOLI
25 HHSearch 77.8544% -98 - C4 -1UXY 14.1 MURB_ECOLI
4 PsiBlast_PDB 77.8145%-100 - C4 -1MBB 13.5 MURB_ECOLI
24 HHSearch 77.1942% -95 - C4 -3I99 13.4 MURB_VIBCH
8 PsiBlast_PDB 76.1641% -95 - C4 -3I99 13.2 MURB_VIBCH
27 HHSearch 64.7725% -94 - C4 -1HSK - MURB_STAAU -
10 PsiBlast_PDB 64.2525% -86 - C4 -4PYT - MURB_BACLD -
45 Fugue 63.6925% -85 - C4 -1HSK - MURB_STAAU -
28 HHSearch 63.2328% -99 * C4 *3TX1 - MURB_LISMO -
9 PsiBlast_PDB 60.4225% -85 - C4 -3TX1 3.2 MURB_LISMO
11 PsiBlast_PDB 58.9424% -90 - C4 -1HSK - MURB_STAAU -
26 HHSearch 58.9032% -87 - C4 -2GQT - MURB_THET8 -
44 Fugue 57.7341%-103 - C4 -1UXY Error ?
46 Fugue 49.8348% -75 - C4 -1UXY Error ?