@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3187: (2016-02-14 )
MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGGAILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEPLSNLDAKLRVEMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPANLFVASFIGSPPMNFIPLRLQRRDGRWTGLLDSGQDRIELPLSLEPGLEEGRELILGVRPEQIALGDGSAAHDLRTEVEVLEPTGPDTLVFVTVNQVKVCCRLAPDVAPAAGSGMSLRFDPARVLLFDAQSGERVAVRTAGVAAEKVTALNGNRQKNS

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




1 PsiBlast_PDB 97.9148%-119 - C2 -4TQU - ? -
2 PsiBlast_PDB 97.2748%-119 - C2 -4TQV - ? -
17 PsiBlast_PDB 93.1943%-121 - C2 -3PUX - MALK_ECOLI -
15 PsiBlast_PDB 92.4543%-120 - C2 -3PUV - MALK_ECOLI -
5 PsiBlast_PDB 92.4243%-118 - C2 -2D62 - ? -
22 PsiBlast_CBE 91.5943%-115 - C2 -4KI0 - ? -
18 PsiBlast_PDB 91.4243%-118 - C2 -3RLF - MALK_ECOLI -
16 PsiBlast_PDB 91.3543%-119 - C2 -3PUW - MALK_ECOLI -
12 PsiBlast_PDB 91.2943%-118 - C2 -3PUY - MALK_ECOLI -
34 PsiBlast_CBE 91.1643%-114 - C2 -2R6G - MALK_ECOLI (first) -
4 PsiBlast_PDB 90.5945%-122 - C2 -1VCI - ? -
23 PsiBlast_CBE 90.4743%-118 - C2 -3RLF - MALK_ECOLI -
3 PsiBlast_PDB 90.4245%-122 - C2 -1V43 - ? -
13 PsiBlast_PDB 89.9043%-116 - C2 -3PUZ - MALK_ECOLI -
24 PsiBlast_CBE 89.7943%-117 - C2 -3PUZ - MALK_ECOLI -
111 HHSearch 89.7646%-118 - C2 -1V43 - ? -
19 PsiBlast_PDB 89.7143%-115 - C2 -4JBW - MALK_ECOLI -
21 PsiBlast_CBE 89.6043%-117 - C2 -4KI0 - ? -
8 PsiBlast_PDB 89.6043%-115 - C2 -1Q1E - MALK_ECOLI -
7 PsiBlast_PDB 89.3043%-117 - C2 -1Q12 - MALK_ECOLI -
62 PsiBlast_CBE 69.3236%-102 - C2 -3FVQ 7.5 FBPC_NEIG1
63 PsiBlast_CBE 68.4636%-104 - C2 -3FVQ 7.1 FBPC_NEIG1
53 PsiBlast_CBE 58.8237%-101 - C2 -4U00 6.2 ?
64 PsiBlast_CBE 57.3733%-102 - C2 -3C4J 5.2 ?
89 PsiBlast_CBE 57.2035%-102 - C2 -1L2T 7.0 Y796_METJA
124 HHSearch 57.1934% -99 * C2 *2OLJ 6.1 ?
130 HHSearch 56.6734% -97 - C2 -1B0U 5.9 HISP_SALTY
73 PsiBlast_CBE 56.4133% -95 - C2 -2OLK 6.5 ?
59 PsiBlast_CBE 56.3138% -84 - C2 -4YMV 4.8 ?
91 PsiBlast_CBE 56.2135% -98 - C2 -3TIF 6.6 Y796_METJA
88 PsiBlast_CBE 56.0335% -99 - C2 -1L2T 6.7 Y796_METJA
78 PsiBlast_CBE 56.0233%-101 - C2 -3C41 5.8 ?
75 PsiBlast_CBE 56.0233% -97 - C2 -2OLK 6.5 ?
90 PsiBlast_CBE 55.9935%-103 - C2 -3TIF 6.8 Y796_METJA
60 PsiBlast_CBE 55.9638% -87 - C2 -4YMU 5.7 ?
77 PsiBlast_CBE 55.7333% -97 - C2 -2OLJ 6.1 ?
72 PsiBlast_CBE 55.4833% -92 - C2 -2OLK 6.3 ?
79 PsiBlast_CBE 55.3733% -97 - C2 -3C41 7.1 ?
61 PsiBlast_CBE 55.3638% -88 - C2 -4YMU 5.8 ?
66 PsiBlast_CBE 55.2933% -96 - C2 -2Q0H 6.0 ?
74 PsiBlast_CBE 55.2633% -94 - C2 -2OLK 6.4 ?
58 PsiBlast_CBE 54.7538% -85 - C2 -4YMV 5.7 ?
65 PsiBlast_CBE 54.6433% -96 - C2 -3C4J 6.7 ?
67 PsiBlast_CBE 54.6333% -96 - C2 -2Q0H 5.8 ?
76 PsiBlast_CBE 52.9833% -90 - C2 -2OLJ 6.2 ?
97 PsiBlast_CBE 52.5533%-102 - C2 -1B0U 6.0 HISP_SALTY