@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3277: (2016-02-15 )
MQNRMMITGAGSGLGREIALRWARDGWRLALADVNEAGLAESLKLVREAGGDGFTQRCDVRDYSQLTALAQSCEEKFGGIDVIVNNAGVASGGFFGELSLEDWDWQIAINLIGVVKGCKAFLPLLERSKGKIVNIASMAALMQGPAMSNYNVAKAGVVALSESLLVELALVEVGVHVVCPSFFQTNLLDSFRGPSPEMKHQVGKLLESSPISAADIADYIHAEVAKGSFLILPHEQARMAWRIKQQNPQAIYDEMTAMAGKMQAKRQRQA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_3(3CSD)
ACT3_STRCO
[Raw transfer]



NAP_I_9(1XR3)
ACT3_STRCO
[Raw transfer]



NDP_B_4(4DC1)
ACT3_STRCO
[Raw transfer]



NAP_B_3(2RHC)
ACT3_STRCO
[Raw transfer]



NDP_A_3(3QRW)
ACT3_STRCO
[Raw transfer]



NDP_B_5(3QRW)
ACT3_STRCO
[Raw transfer]



NAP_B_5(2RH4)
ACT3_STRCO
[Raw transfer]



NAP_B_7(1W4Z)
ACT3_STRCO
[Raw transfer]



NAP_A_5(1X7G)
ACT3_STRCO
[Raw transfer]



NAP_B_7(1X7G)
ACT3_STRCO
[Raw transfer]



NDP_B_3(3RI3)
ACT3_STRCO
[Raw transfer]



NDP_A_3(4DBZ)
ACT3_STRCO
[Raw transfer]



NAP_A_3(2RH4)
ACT3_STRCO
[Raw transfer]



NAP_A_4(2RHR)
ACT3_STRCO
[Raw transfer]



NAP_A_5(1W4Z)
ACT3_STRCO
[Raw transfer]



NDP_A_6(3RI3)
ACT3_STRCO
[Raw transfer]



NAP_B_7(1X7H)
ACT3_STRCO
[Raw transfer]



NAP_A_5(1X7H)
ACT3_STRCO
[Raw transfer]



NDP_A_6(3CSD)
ACT3_STRCO
[Raw transfer]



NDP_B_4(4DBZ)
ACT3_STRCO
[Raw transfer]



NAP_B_3(2RHR)
ACT3_STRCO
[Raw transfer]



NAD_B_4(3WYE)
?
[Raw transfer]



NAP_A_4(2RHC)
ACT3_STRCO
[Raw transfer]



NAP_E_5(1XR3)
ACT3_STRCO
[Raw transfer]



NAD_D_11(2CFC)
HCDR_XANP2
[Raw transfer]



NAD_B_12(4URF)
?
[Raw transfer]



NAD_A_3(4URF)
?
[Raw transfer]



NAD_A_3(3WYE)
?
[Raw transfer]



1PS_B_6(4URE)
?
[Raw transfer]
1 PsiBlast_PDB 98.2933%-106 - C2 -3TJR - ? -
3 PsiBlast_PDB 90.5336% -97 - C2 -2RHC 11.6 ACT3_STRCO
26 PsiBlast_CBE 89.8736% -95 - C2 -1W4Z 12.1 ACT3_STRCO
31 PsiBlast_CBE 89.4936% -97 - C2 -3QRW 10.9 ACT3_STRCO
27 PsiBlast_CBE 89.3536% -98 - C2 -4DC1 10.0 ACT3_STRCO
22 PsiBlast_CBE 89.2536% -96 - C2 -2RH4 11.2 ACT3_STRCO
13 PsiBlast_PDB 88.7436%-100 - C2 -3RI3 9.1 ACT3_STRCO
28 PsiBlast_CBE 88.7336% -98 - C2 -4DBZ 7.4 ACT3_STRCO
24 PsiBlast_CBE 87.9536% -97 - C2 -1X7H 11.2 ACT3_STRCO
9 PsiBlast_PDB 87.9136% -98 - C2 -4DBZ 11.9 ACT3_STRCO
14 PsiBlast_PDB 87.7935% -98 - C2 -4DC0 - ACT3_STRCO -
2 PsiBlast_PDB 87.5036% -95 - C2 -2RH4 12.3 ACT3_STRCO
21 PsiBlast_CBE 87.4736% -96 - C2 -2RHC 11.9 ACT3_STRCO
8 PsiBlast_PDB 87.3236% -93 - C2 -4DC1 - ACT3_STRCO -
30 PsiBlast_CBE 86.9736% -98 - C2 -3RI3 11.1 ACT3_STRCO
11 PsiBlast_PDB 86.8036% -96 - C2 -3CSD 11.4 ACT3_STRCO
5 PsiBlast_PDB 86.7436% -95 - C2 -1X7H 11.7 ACT3_STRCO
7 PsiBlast_PDB 86.3936% -97 - C2 -1W4Z 12.1 ACT3_STRCO
32 PsiBlast_CBE 86.0236% -97 - C2 -3CSD 11.6 ACT3_STRCO
4 PsiBlast_PDB 86.0136% -95 - C2 -1X7G 7.6 ACT3_STRCO
23 PsiBlast_CBE 84.3436% -95 - C2 -1XR3 10.8 ACT3_STRCO
6 PsiBlast_PDB 83.9036% -93 - C2 -1XR3 12.2 ACT3_STRCO
29 PsiBlast_CBE 83.7436% -96 - C2 -2RHR 11.9 ACT3_STRCO
12 PsiBlast_PDB 83.4536% -96 - C2 -3QRW 11.8 ACT3_STRCO
10 PsiBlast_PDB 82.0836% -94 - C2 -2RHR 10.9 ACT3_STRCO
25 PsiBlast_CBE 81.8236% -94 - C2 -1X7G 11.0 ACT3_STRCO
34 PsiBlast_CBE 81.1434% -92 - C2 -2CFC 9.0 HCDR_XANP2
49 PsiBlast_CBE 65.2535%-101 - C2 -4URF 10.1 ?
77 PsiBlast_CBE 64.3133% -88 - C2 -3WYE 8.9 ?
50 PsiBlast_CBE 63.5735%-106 - C2 -4URF 10.9 ?
51 PsiBlast_CBE 63.0235%-104 - C2 -4URE 3.6 ?
76 PsiBlast_CBE 62.2333% -92 - C2 -3WYE 10.8 ?