Study : PA3306 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: SCC_B_5(3H8O) / Model_10(3H8O/A) = [3.2] Download298.923.92MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
Complex: AKG_A_5(3BUC) / Model_5(3BUC/A) = [3.3] Download374.9928.96MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
Complex: AKG_A_5(3RZK) / Model_15(3RZK/A) = [3.4] Download381.6133.29MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
Complex: AKG_A_5(3BU0) / Model_2(3BU0/A) = [3.6] Download372.5729.68MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
Complex: AKG_A_5(3S57) / Model_53(3S57/A) = [3.9] Download341.8525.05MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
Consensus
[pKd Mean = 3.48]
-353
(s=30)
24
(s=10)
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP