@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3332: (2016-02-16 )
MNAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTVRFTDVQFYETADPDLAIGEFHGDGVATVSGGKLAQDYISVLRTRDGQILLYRDFWNPLRHLEALGGVEAAAKIVQGA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DOG_A_5(4J8T)
Y3332_PSEAE
[Raw transfer]




DOG_D_8(4J8T)
Y3332_PSEAE
[Raw transfer]




DOG_C_7(4J8T)
Y3332_PSEAE
[Raw transfer]




DOG_E_14(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_B_11(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_B_6(4J8T)
Y3332_PSEAE
[Raw transfer]




DOG_D_13(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_A_10(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_I_18(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_C_12(4J9A)
Y3332_PSEAE
[Raw transfer]




DOG_G_16(4J9A)
Y3332_PSEAE
[Raw transfer]




PGE_A_3(1Z1S)
Y3332_PSEAE
[Raw transfer]




DOG_F_15(4J9A)
Y3332_PSEAE
[Raw transfer]




PGE_A_3(1Z1S)
Y3332_PSEAE
[Raw transfer]




GOL_A_10(1S5A)
YESE_BACSU
[Raw transfer]




GOL_B_12(1S5A)
YESE_BACSU
[Raw transfer]




GOL_C_11(1S5A)
YESE_BACSU
[Raw transfer]




34 HHSearch 95.99100%-118 - C4 -1Z1S 2.8 Y3332_PSEAE
1 PsiBlast_PDB 95.91100%-118 - C4 -1Z1S 2.8 Y3332_PSEAE
2 PsiBlast_PDB 92.7489%-115 - C4 -4J8T 5.3 Y3332_PSEAE
21 PsiBlast_CBE 90.7789%-114 - C4 -4J8T 5.2 Y3332_PSEAE
23 PsiBlast_CBE 89.7489%-121 - C4 -4J8T 4.8 Y3332_PSEAE
22 PsiBlast_CBE 88.8589%-119 - C4 -4J8T 6.0 Y3332_PSEAE
26 PsiBlast_CBE 87.6286%-113 - C4 -4J9A 4.1 Y3332_PSEAE
28 PsiBlast_CBE 87.3486%-115 - C4 -4J9A 4.0 Y3332_PSEAE
3 PsiBlast_PDB 86.0486%-114 - C4 -4J9A 5.9 Y3332_PSEAE
29 PsiBlast_CBE 85.5886%-114 - C4 -4J9A 5.7 Y3332_PSEAE
30 PsiBlast_CBE 84.3486%-118 - C4 -4J9A 6.0 Y3332_PSEAE
24 PsiBlast_CBE 84.2986%-125 - C4 -4J9A 5.1 Y3332_PSEAE
27 PsiBlast_CBE 82.7186%-133 - C4 -4J9A 2.8 Y3332_PSEAE
25 PsiBlast_CBE 82.2586%-122 - C4 -4J9A 4.8 Y3332_PSEAE
35 HHSearch 77.1138% -97 * C4 *1S5A - YESE_BACSU -
32 PsiBlast_CBE 64.9941% -91 - C4 -1S5A 3.3 YESE_BACSU
4 PsiBlast_PDB 64.1042% -91 - C4 -1S5A 2.2 YESE_BACSU
33 PsiBlast_CBE 63.6441% -92 - C4 -1S5A 2.2 YESE_BACSU
31 PsiBlast_CBE 63.0041% -86 - C4 -1S5A - YESE_BACSU -
38 HHSearch 61.1920% -83 - C4 -3FF0 - PHZB2_PSEAE -