@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3385: (2016-02-16 )
MRPLKQATPTYSSRTADKFVVRLPEGMREQIAEVARSHHRSMNSEIIARLEQSLLQEGALQDNLGVRLDSPELSLHERELLQRFRQLTHRQQNALVALIAHDAELAQA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_5(3QOQ)
?
[Raw transfer]

-

NACID_E_5(3QOQ)
?
[Raw transfer]

-

NACID_E_5(3QOQ)
?
[Raw transfer]

-

NACID_E_5(3QOQ)
?
[Raw transfer]

-

NACID_E_5(3QOQ)
?
[Raw transfer]

-

NACID_E_5(3QOQ)
?
[Raw transfer]

-

33 HHSearch 92.11100%-100 - C5 -3QOQ 3.3 ?
1 PsiBlast_PDB 91.2696%-100 - C5 -3QOQ 3.3 ?
54 Fugue 90.46100%-100 - C5 -3QOQ 3.3 ?
21 PsiBlast_CBE 82.3096% -76 - C5 -3QOQ 3.5 ?
22 PsiBlast_CBE 80.6496% -68 - C5 -3QOQ 2.4 ?
23 PsiBlast_CBE 79.3996% -86 - C5 -3QOQ 2.7 ?
14 PsiBlast_PDB 65.2135% -80 - C5 -1QTG - RARC_BPP22 -
12 PsiBlast_PDB 61.7135% -74 - C5 -1PAR - RARC_BPP22 -
35 HHSearch 60.7432% -55 - C5 -1NLA - RARC_BPP22 -
18 PsiBlast_PDB 60.3635% -62 - C5 -1BDV - RARC_BPP22 -
39 HHSearch 59.3230% -50 - C5 -1MNT - RMNT_BPP22 -
13 PsiBlast_PDB 59.0735% -74 - C5 -1BDT - RARC_BPP22 -
24 PsiBlast_CBE 59.0435% -48 - C5 -1PAR - RARC_BPP22 -
55 Fugue 58.6030% -26 - C5 -1MNT - RMNT_BPP22 -
37 HHSearch 58.3930% -60 - C5 -1BAZ - RARC_BPP22 -
15 PsiBlast_PDB 58.1935% -68 - C5 -1MYK - RARC_BPP22 -
34 HHSearch 58.0328% -32 - C5 -1U9P - RARC_BPP22 -
56 Fugue 57.8328% -59 * C5 *1BAZ - RARC_BPP22 -
9 PsiBlast_PDB 57.8035% -66 - C5 -1NLA - RARC_BPP22 -
2 PsiBlast_PDB 57.5829% -38 - C5 -1MNT - RMNT_BPP22 -