@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3407: (2016-02-16 )
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

WPC_B_4(3W8O)
?
[Raw transfer]



MH0_A_3(3WAH)
?
[Raw transfer]



MH0_B_4(3WAH)
?
[Raw transfer]



HEM_A_3(3ELL)
?
[Raw transfer]



HEM_B_4(3ELL)
?
[Raw transfer]



HEM_A_3(4O6T)
?
[Raw transfer]



HEM_A_3(4O6Q)
?
[Raw transfer]



WPC_A_3(3W8O)
?
[Raw transfer]



HEM_A_4(4O6U)
?
[Raw transfer]



HEM_A_6(4O6S)
?
[Raw transfer]



YOM_A_2(3W8M)
?
[Raw transfer]



FMT_A_2(4O6Q)
?
[Raw transfer]



HEM_B_7(3MOM)
?
[Raw transfer]



HEM_A_3(1B2V)
HASA_SERMA
[Raw transfer]



HEM_A_3(1B2V)
HASA_SERMA
[Raw transfer]



HEM_A_4(3MOM)
?
[Raw transfer]



HEM_A_3(1DK0)
HASA_SERMA
[Raw transfer]



HEM_A_3(1DK0)
HASA_SERMA
[Raw transfer]



HEM_B_4(1DK0)
HASA_SERMA
[Raw transfer]



HEM_B_4(3MOL)
?
[Raw transfer]



HEM_A_6(1DKH)
HASA_SERMA
[Raw transfer]



HEM_B_5(2CN4)
HASA_SERMA
[Raw transfer]



HEM_B_5(2CN4)
HASA_SERMA
[Raw transfer]



EDO_A_3(4O6U)
?
[Raw transfer]



HEM_B_4(3MOL)
?
[Raw transfer]



EDO_A_2(4O6T)
?
[Raw transfer]
4 PsiBlast_PDB 99.46100%-124 - C3 -3ELL 12.6 ?
23 PsiBlast_CBE 99.04100%-119 - C3 -3ELL 12.4 ?
3 PsiBlast_PDB 99.02100%-121 - C3 -3WAH 12.6 ?
1 PsiBlast_PDB 98.91100%-120 - C3 -3W8M 9.6 ?
21 PsiBlast_CBE 98.60100%-118 - C3 -3WAH 12.6 ?
22 PsiBlast_CBE 98.23100%-118 - C3 -3W8O 12.1 ?
2 PsiBlast_PDB 98.10100%-121 - C3 -3W8O 11.9 ?
10 PsiBlast_PDB 97.6399%-123 - C3 -4O6T 12.6 ?
11 PsiBlast_PDB 97.0499%-121 - C3 -4O6U 11.8 ?
6 PsiBlast_PDB 96.9899%-119 - C3 -4O6Q 13.0 ?
9 PsiBlast_PDB 96.2699%-119 - C3 -4O6S 11.6 ?
7 PsiBlast_PDB 96.1699%-110 - C3 -3MOL 2.8 ?
5 PsiBlast_PDB 95.81100%-114 - C3 -3MOK - ? -
24 PsiBlast_CBE 95.4099%-122 - C3 -3MOM 11.8 ?
8 PsiBlast_PDB 94.3099%-122 - C3 -3MOM 11.5 ?
25 PsiBlast_CBE 93.3799%-119 - C3 -3MOL 9.6 ?
12 PsiBlast_PDB 79.9551%-109 - C3 -1B2V 11.5 HASA_SERMA
39 Fugue 79.6351%-108 * C3 *1B2V 11.5 HASA_SERMA
26 PsiBlast_CBE 79.1651%-108 - C3 -1DK0 11.9 HASA_SERMA
30 HHSearch 78.9350%-105 - C3 -1DK0 11.9 HASA_SERMA
13 PsiBlast_PDB 78.7751%-108 - C3 -1DK0 11.8 HASA_SERMA
14 PsiBlast_PDB 77.0851%-112 - C3 -1DKH 10.3 HASA_SERMA
29 PsiBlast_CBE 71.3552%-107 - C3 -2CN4 10.0 HASA_SERMA
20 PsiBlast_PDB 70.2752%-100 - C3 -2CN4 6.8 HASA_SERMA