@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3511: (2016-02-17 )
MSQNSLLDGRRVLLTGGARGLGYAFAEAAARAGARVVIADILEERVQRSARELAEQGLDISGLPLDLADPVSIERCVAAAVERLGGLDGLVNNASITNSGGKSCEELEIEVFDRVLQVNVRGTWLMTRACLPALRESGRGAVVNLASDTPLWGAPNLLAYSASKGALIAMTRSLARELGGDGITVNAIAPGLVEVEATEYVPAARHRLYREQRALQRGQQPADVCGAVLFALSDLSRFITGQTLPVNGGFVMP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_G_7(2D1Y)
?
[Raw transfer]




NAD_F_6(2D1Y)
?
[Raw transfer]




NAD_E_5(2D1Y)
?
[Raw transfer]




NAD_H_8(2D1Y)
?
[Raw transfer]




87 PsiBlast_CBE 89.3839%-102 - C1 -2D1Y 9.0 ?
88 PsiBlast_CBE 88.6939%-102 - C1 -2D1Y 9.5 ?
34 PsiBlast_CBE 87.2338%-106 - C1 -1NFQ - HSD_MYCTU -
12 PsiBlast_PDB 87.0038%-104 - C1 -1NFR - HSD_MYCTU -
35 PsiBlast_CBE 86.8938%-105 - C1 -1NFQ - HSD_MYCTU -
36 PsiBlast_CBE 86.1438%-104 - C1 -1NFQ - HSD_MYCTU -
9 PsiBlast_PDB 86.0138%-105 - C1 -1NFQ - HSD_MYCTU -
8 PsiBlast_PDB 85.3438%-106 - C1 -1NFF - HSD_MYCTU -
4 PsiBlast_PDB 85.0935%-100 - C1 -2PNF - FABG_AQUAE -
89 PsiBlast_CBE 85.0539% -99 - C1 -2D1Y 9.3 ?
37 PsiBlast_CBE 85.0338%-106 - C1 -1NFF - HSD_MYCTU -
5 PsiBlast_PDB 84.9935%-100 - C1 -2P68 - FABG_AQUAE -
10 PsiBlast_PDB 84.5835% -99 - C1 -1VL8 - ? -
7 PsiBlast_PDB 84.3635% -97 - C1 -2ZAT - DHRS4_PIG -
32 PsiBlast_CBE 84.3535% -98 - C1 -2ZAT - DHRS4_PIG -
86 PsiBlast_CBE 84.2539% -99 - C1 -2D1Y 9.0 ?
33 PsiBlast_CBE 83.9035% -98 - C1 -2ZAT - DHRS4_PIG -
38 PsiBlast_CBE 83.8435%-100 - C1 -1VL8 - ? -
30 PsiBlast_CBE 83.3835%-101 - C1 -2PNF - FABG_AQUAE -
40 PsiBlast_CBE 83.3534% -96 - C1 -4JRO - ? -