@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3533: (2016-02-18 )
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSH_A_10(2YAN)
GLRX3_HUMAN
[Raw transfer]




FES_A_3(2WCI)
GLRX4_ECOLI
[Raw transfer]




FES_A_3(2WCI)
GLRX4_ECOLI
[Raw transfer]




GSH_B_6(2WCI)
GLRX4_ECOLI
[Raw transfer]




GSH_A_4(2WCI)
GLRX4_ECOLI
[Raw transfer]




GSH_A_4(2WCI)
GLRX4_ECOLI
[Raw transfer]




GSH_A_5(2WUL)
GLRX5_HUMAN
[Raw transfer]




GSH_B_7(2WUL)
GLRX5_HUMAN
[Raw transfer]




GSH_D_12(2WUL)
GLRX5_HUMAN
[Raw transfer]




GSH_A_5(2WUL)
GLRX5_HUMAN
[Raw transfer]




GSH_B_14(2YAN)

[Raw transfer]




EDO_B_13(2YAN)

[Raw transfer]




GSH_D_12(2WUL)
GLRX5_HUMAN
[Raw transfer]




21 PsiBlast_CBE 96.6774%-157 - C3 -2WCI 5.4 GLRX4_ECOLI
34 HHSearch 95.1173%-152 - C3 -2WCI 5.6 GLRX4_ECOLI
1 PsiBlast_PDB 94.3374%-141 - C3 -1YKA - GLRX4_ECOLI -
2 PsiBlast_PDB 94.3174%-152 - C3 -2WCI 5.6 GLRX4_ECOLI
5 PsiBlast_PDB 81.6139%-138 - C3 -3GX8 - GLRX5_YEAST -
3 PsiBlast_PDB 79.9242%-153 - C3 -2LKU - ? -
35 HHSearch 79.8740%-129 - C3 -3GX8 - GLRX5_YEAST -
4 PsiBlast_PDB 77.7942%-143 - C3 -3IPZ - GRS14_ARATH -
36 HHSearch 77.3541%-140 - C3 -3IPZ - GRS14_ARATH -
9 PsiBlast_PDB 75.9038%-158 - C3 -1WIK - -
22 PsiBlast_CBE 75.7640%-142 - C3 -3ZYW - -
6 PsiBlast_PDB 75.6340%-144 - C3 -3ZYW - GLRX3_HUMAN -
33 HHSearch 73.8536%-129 - C3 -2WUL 4.9 GLRX5_HUMAN
38 HHSearch 73.3040%-138 - C3 -2YAN Error GLRX3_HUMAN
24 PsiBlast_CBE 72.9740%-132 - C3 -2WUL 2.0 GLRX5_HUMAN
23 PsiBlast_CBE 72.4840%-135 - C3 -2WUL 5.0 GLRX5_HUMAN
26 PsiBlast_CBE 72.0944%-166 - C3 -2YAN 3.0
7 PsiBlast_PDB 72.0640%-134 - C3 -2WUL 4.9 GLRX5_HUMAN
37 HHSearch 71.5836%-139 - C3 -1WIK - -
25 PsiBlast_CBE 71.0040%-130 - C3 -2WUL 4.8 GLRX5_HUMAN