@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3617: (2016-02-19 )
MDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEKTIRDQLLAKSGPVKADAEEVADAEAD

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]



AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]



SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]



ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]



DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]



ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]



DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]



DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]



AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]



ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]



SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]



DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]



AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]



ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]



DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]



SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]



ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]



ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]



SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]



DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]



ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]



GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]



GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]
1 PsiBlast_PDB 91.9474%-101 - C1 -3CMT - RECA_ECOLI -
2 PsiBlast_PDB 91.8574%-102 - C1 -3CMW - RECA_ECOLI -
57 HHSearch 91.2973%-100 - C1 -3CMW - RECA_ECOLI -
22 PsiBlast_CBE 91.1574%-101 - C1 -3CMW - RECA_ECOLI -
23 PsiBlast_CBE 91.1074%-101 - C1 -3CMT - RECA_ECOLI -
60 HHSearch 91.0374%-100 - C1 -3CMW - RECA_ECOLI -
3 PsiBlast_PDB 90.7374%-101 - C1 -3CMX - RECA_ECOLI -
21 PsiBlast_CBE 89.7074%-101 - C1 -3CMX - RECA_ECOLI -
4 PsiBlast_PDB 89.4774% -99 - C1 -3CMU - RECA_ECOLI -
61 HHSearch 88.9574% -98 - C1 -3CMU - RECA_ECOLI -
62 HHSearch 88.2975% -99 - C1 -3CMU - RECA_ECOLI -
37 PsiBlast_CBE 87.7965% -92 - C1 -4PR0 2.3 RECA_MYCTU
38 PsiBlast_CBE 87.4965% -96 - C1 -4PQY 2.3 RECA_MYCTU
7 PsiBlast_PDB 87.3271%-101 - C1 -1XMS 6.4 RECA_ECOLI
36 PsiBlast_CBE 87.1563% -97 - C1 -2ZRH - RECA_MYCS2 -
25 PsiBlast_CBE 86.3963% -95 - C1 -2ZRO 7.5 RECA_MYCS2
26 PsiBlast_CBE 86.2163%-101 - C1 -2ZRA 6.0 RECA_MYCS2
30 PsiBlast_CBE 86.1763% -96 - C1 -2ZRE 5.6 RECA_MYCS2
20 PsiBlast_PDB 86.1363% -91 - C1 -2ZRM 6.6 RECA_MYCS2
32 PsiBlast_CBE 85.8163% -89 - C1 -2ZRC - RECA_MYCS2 -
34 PsiBlast_CBE 85.7863% -92 - C1 -2ZRK 8.0 RECA_MYCS2
35 PsiBlast_CBE 85.7463% -94 - C1 -2ZRJ 6.7 RECA_MYCS2
39 PsiBlast_CBE 85.2964% -98 - C1 -1MO6 6.7 RECA_MYCTU
29 PsiBlast_CBE 85.1163% -98 - C1 -2ZRF 7.3 RECA_MYCS2
42 PsiBlast_CBE 84.9964% -95 - C1 -1MO3 6.2 RECA_MYCTU
24 PsiBlast_CBE 84.8863% -96 - C1 -2ZRP 6.0 RECA_MYCS2
40 PsiBlast_CBE 84.5464% -90 - C1 -1MO5 5.7 RECA_MYCTU
43 PsiBlast_CBE 84.4664% -97 - C1 -1G18 5.7 RECA_MYCTU
28 PsiBlast_CBE 84.0863% -98 - C1 -2ZRG 6.6 RECA_MYCS2
31 PsiBlast_CBE 84.0763% -90 - C1 -2ZRD 6.5 RECA_MYCS2
41 PsiBlast_CBE 83.9264% -91 * C1 *1MO4 4.7 RECA_MYCTU
16 PsiBlast_PDB 83.8763% -94 - C1 -2OEP 5.9 RECA_MYCS2
33 PsiBlast_CBE 83.5563% -92 - C1 -2ZRL 5.5 RECA_MYCS2
13 PsiBlast_PDB 83.0863% -93 - C1 -2ODN 7.9 RECA_MYCS2
12 PsiBlast_PDB 82.8663% -88 - C1 -2G88 8.1 RECA_MYCS2
14 PsiBlast_PDB 82.8263% -96 - C1 -2ODW 5.7 RECA_MYCS2
9 PsiBlast_PDB 82.5463% -95 - C1 -1UBE 5.6 RECA_MYCS2
11 PsiBlast_PDB 82.4563% -91 - C1 -1UBG 6.6 RECA_MYCS2
10 PsiBlast_PDB 82.3063% -93 - C1 -1UBF 6.8 RECA_MYCS2