@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3646: (2016-02-19 )
MMSTLSYTLGQLAAHVGAEVRGDADLPIQGLATLQEAGPAQLSFLANPQYRKYLPESRAGAVLLTAADADGFAGTALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTMVTRSITEPGSYSSGTAMQPAAEWKKSAARIRQLDDMARRLQQLEKRLAAVTSSGDASSDA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLM_B_12(2IU8)
LPXD_CHLTR
[Raw transfer]



PLM_B_10(2IU9)
LPXD_CHLTR
[Raw transfer]



PLM_A_6(2IU8)
LPXD_CHLTR
[Raw transfer]



PLM_C_15(2IU8)
LPXD_CHLTR
[Raw transfer]



PLM_C_15(2IU9)
LPXD_CHLTR
[Raw transfer]



CHAIN_L_12(4IHG)
LPXD_ECOLI
[Raw transfer]
-
EDO_A_3(3PMO)
LPXD_PSEAE
[Raw transfer]



EDO_A_3(3PMO)
LPXD_PSEAE
[Raw transfer]
72 HHSearch 94.73100%-150 - C2 -3PMO 2.8 LPXD_PSEAE
1 PsiBlast_PDB 94.67100%-150 - C2 -3PMO 2.8 LPXD_PSEAE
22 PsiBlast_CBE 79.8651%-149 - C2 -4IHH - LPXD_ECOLI -
31 PsiBlast_CBE 79.4651%-150 - C2 -4IHF - LPXD_ECOLI -
27 PsiBlast_CBE 79.3851%-150 - C2 -4IHG - LPXD_ECOLI -
23 PsiBlast_CBE 79.3151%-151 - C2 -4IHH - LPXD_ECOLI -
24 PsiBlast_CBE 79.2451%-151 - C2 -4IHH - LPXD_ECOLI -
2 PsiBlast_PDB 78.6851%-149 - C2 -4IHH - LPXD_ECOLI -
33 PsiBlast_CBE 78.5451%-150 - C2 -4IHF - LPXD_ECOLI -
26 PsiBlast_CBE 78.4451%-150 - C2 -4IHG Error LPXD_ECOLI
25 PsiBlast_CBE 78.4151%-146 - C2 -4IHH - LPXD_ECOLI -
4 PsiBlast_PDB 78.3751%-148 - C2 -4IHF - LPXD_ECOLI -
35 PsiBlast_CBE 78.2851%-148 - C2 -4IHF - LPXD_ECOLI -
30 PsiBlast_CBE 78.2851%-147 - C2 -4IHG - LPXD_ECOLI -
21 PsiBlast_CBE 78.2651%-146 - C2 -4IHH - LPXD_ECOLI -
29 PsiBlast_CBE 78.2451%-150 - C2 -4IHG - LPXD_ECOLI -
32 PsiBlast_CBE 78.0551%-147 - C2 -4IHF - LPXD_ECOLI -
34 PsiBlast_CBE 77.8951%-148 - C2 -4IHF - LPXD_ECOLI -
5 PsiBlast_PDB 77.6043%-154 - C2 -4E75 - LPXD_ACIBS -
6 PsiBlast_PDB 77.2943%-154 - C2 -4E79 - LPXD_ACIBS -
38 PsiBlast_CBE 74.8537%-141 - C2 -2IU9 2.0 LPXD_CHLTR
41 PsiBlast_CBE 74.6937%-138 - C2 -2IU8 2.2 LPXD_CHLTR
39 PsiBlast_CBE 74.5937%-138 - C2 -2IU9 3.1 LPXD_CHLTR
40 PsiBlast_CBE 74.2837%-141 - C2 -2IU8 2.9 LPXD_CHLTR
73 HHSearch 73.2337%-139 - C2 -2IU8 3.4 LPXD_CHLTR