@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3743: (2016-02-20 )
MDKRLWVGVVSIFPEMFRAISDYGITSRAVKQGLLTLTCWNPRDYTEDRHQTVDDRPFGGGPGMVMKIKPLEGALADARQAAGGRKAKVIYLSPQGRQLTQAGVRELAEEEALILIAGRYEGIDERFIEEHVDEEWSIGDYVLSGGELPAMVLVDAVTRLLPGALGHADSAEEDSFTDGLLDCPHYTRPEVYADKRVPEVLLSGNHEHIRRWRLQQALGRTWERRADLLDSRSLSGEEQKLLAEYIRQRDDS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SFG_A_2(4YVH)
?
[Raw transfer]



SAH_A_2(1P9P)
TRMD_ECOLI
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



SAH_E_5(1UAM)
TRMD_HAEIN
[Raw transfer]



SAM_C_3(1UAK)
TRMD_HAEIN
[Raw transfer]



SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]



21W_B_8(4MCB)
TRMD_HAEIN
[Raw transfer]



21X_A_3(4MCC)
TRMD_HAEIN
[Raw transfer]



SFG_B_5(4YVJ)
?
[Raw transfer]



SFG_B_5(4YVI)
?
[Raw transfer]



SAH_A_3(4H3Y)
TRMD_BURP8
[Raw transfer]



21X_B_4(4MCC)
TRMD_HAEIN
[Raw transfer]



SAM_A_2(4YVG)
?
[Raw transfer]



SFG_A_4(4YVI)
?
[Raw transfer]



SAH_A_3(4H3Z)
TRMD_BURP8
[Raw transfer]



SAH_B_6(4H3Z)
TRMD_BURP8
[Raw transfer]



ADN_A_2(3AXZ)
TRMD_HAEIN
[Raw transfer]



SAH_A_2(4IG6)
TRMD_ANAPZ
[Raw transfer]



SFG_B_5(4YVK)
?
[Raw transfer]



22L_A_2(4MCD)
TRMD_HAEIN
[Raw transfer]



EDO_B_6(3QUV)
?
[Raw transfer]



EDO_A_3(3QUV)
?
[Raw transfer]



EDO_A_4(3QUV)
?
[Raw transfer]



EDO_A_4(3QUV)
?
[Raw transfer]
54 Fugue 98.2561%-121 * C5 *1UAL 7.0 TRMD_HAEIN
22 PsiBlast_CBE 96.4164%-114 - C5 -4MCB 7.0 TRMD_HAEIN
12 PsiBlast_PDB 96.1264%-117 - C5 -1UAM 7.5 TRMD_HAEIN
1 PsiBlast_PDB 95.5166%-125 - C5 -1P9P 7.1 TRMD_ECOLI
11 PsiBlast_PDB 95.2964%-125 - C5 -1UAL 7.0 TRMD_HAEIN
24 PsiBlast_CBE 95.0364%-115 - C5 -4YVJ 6.0 ?
25 PsiBlast_CBE 94.8764%-118 - C5 -4YVI 7.8 ?
4 PsiBlast_PDB 94.5764%-124 - C5 -4MCD 6.0 TRMD_HAEIN
23 PsiBlast_CBE 94.5664%-114 - C5 -4YVK 6.3 ?
10 PsiBlast_PDB 94.5164%-124 - C5 -1UAK 8.2 TRMD_HAEIN
5 PsiBlast_PDB 93.9664%-124 - C5 -3AXZ 6.1 TRMD_HAEIN
6 PsiBlast_PDB 93.9364%-123 - C5 -4YVG 8.2 ?
8 PsiBlast_PDB 93.7064%-122 - C5 -4YVI 7.7 ?
21 PsiBlast_CBE 93.4364%-123 - C5 -4MCC 6.6 TRMD_HAEIN
7 PsiBlast_PDB 93.3064%-121 - C5 -4YVH 7.8 ?
9 PsiBlast_PDB 93.0564%-124 - C5 -1UAJ - TRMD_HAEIN -
13 PsiBlast_PDB 87.9955%-110 - C5 -4H3Y 7.0 TRMD_BURP8
3 PsiBlast_PDB 87.3564%-128 - C5 -4MCC 6.7 TRMD_HAEIN
14 PsiBlast_PDB 87.3355%-111 - C5 -4H3Z 7.5 TRMD_BURP8
2 PsiBlast_PDB 86.6864%-127 - C5 -4MCB - TRMD_HAEIN -
26 PsiBlast_CBE 86.1955%-108 - C5 -4H3Z 6.8 TRMD_BURP8
18 PsiBlast_PDB 79.2341%-124 - C5 -3QUV 3.1 ?
28 PsiBlast_CBE 78.4341%-115 - C5 -3QUV 2.9 ?
17 PsiBlast_PDB 76.4441% -96 - C5 -4IG6 7.7 TRMD_ANAPZ
33 HHSearch 76.3743%-109 - C5 -3QUV 2.5 ?