@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3759: (2016-02-20 )
MTSLMLEEALSAATVASRQLAVLDACLPALGQRLREVDPNLALTVARGSSDHAASYFAYLAMQHAGLPVASLPMSVVTLNRSPLRVAGQAVFAFSQSGQSPDLVDSLRILRERGALGIALVNAEDSPLEAASEFVVPLCAGAERSVAATKSFIATLSASARLLAHWQRDNALLAAGQGLAAGLEQAARLDWSPAIEVLRDCQRLMVIGRGAGYAIAQEAALKFKETSAIQAEAFSSAEVRHGPMALVEERYPLLVFAPRGPEQEGLLALAEDMRQRGAQVLLAAPDDIAERDLPLQRAAHPALDPILAIQSFYVMAAGLAEARGMDPDQPRHLSKVTRTH

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]



AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]



GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



F1P_B_4(2DF8)
?
[Raw transfer]



G6Q_A_3(2J6H)
GLMS_ECOLI
[Raw transfer]



F1P_A_3(2DF8)
?
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]



EDO_A_6(2DEC)
?
[Raw transfer]
34 HHSearch 95.3940% -96 - C4 -3FJ1 - ? -
1 PsiBlast_PDB 92.5443%-100 - C4 -3FJ1 - ? -
6 PsiBlast_PDB 86.2431% -99 - C4 -2J6H 3.5 GLMS_ECOLI
10 PsiBlast_PDB 85.7830%-102 - C4 -4AMV - GLMS_ECOLI -
23 PsiBlast_CBE 85.6431%-100 - C4 -3OOJ - GLMS_ECOLI -
2 PsiBlast_PDB 85.3731% -98 - C4 -1MOS 4.9 GLMS_ECOLI
22 PsiBlast_CBE 85.1831% -98 - C4 -3OOJ - GLMS_ECOLI -
4 PsiBlast_PDB 85.1131% -96 - C4 -1MOR - GLMS_ECOLI -
28 PsiBlast_CBE 85.0831% -97 - C4 -2J6H 3.1 GLMS_ECOLI
5 PsiBlast_PDB 85.0031% -97 - C4 -3OOJ - GLMS_ECOLI -
25 PsiBlast_CBE 84.7631% -98 - C4 -3OOJ - GLMS_ECOLI -
24 PsiBlast_CBE 84.7231% -98 - C4 -3OOJ - GLMS_ECOLI -
27 PsiBlast_CBE 84.5431% -98 - C4 -3OOJ - GLMS_ECOLI -
26 PsiBlast_CBE 84.3531% -97 - C4 -3OOJ - GLMS_ECOLI -
21 PsiBlast_CBE 84.2231% -99 - C4 -3OOJ - GLMS_ECOLI -
3 PsiBlast_PDB 84.1131% -99 - C4 -1MOQ 4.3 GLMS_ECOLI
9 PsiBlast_PDB 82.6230% -93 - C4 -1JXA - GLMS_ECOLI -
40 HHSearch 82.1527% -87 - C4 -1MOQ - GLMS_ECOLI -
8 PsiBlast_PDB 82.0731% -92 - C4 -2VF5 3.0 GLMS_ECOLI
7 PsiBlast_PDB 81.8831% -92 - C4 -2VF4 - GLMS_ECOLI -
31 PsiBlast_CBE 75.9331% -85 - C4 -2DF8 3.2 ?
20 PsiBlast_PDB 75.6431% -82 - C4 -2DEC 3.0 ?
32 PsiBlast_CBE 75.4231% -84 - C4 -2DF8 3.6 ?