@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3999: (2016-02-22 )
MNITTIAKRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAIIYGEPSHYAIYAQKEFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLEPQLMAPIQQGQVIGKVEVKLDDKVIRSADLVALNAVEEGGFFRRLWDSIRLFFYGLFN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



CFX_A_2(3MZE)
DACA_ECOLI
[Raw transfer]



IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]



GOL_A_4(3BEC)
DACA_ECOLI
[Raw transfer]



HJ3_A_2(3BEB)
DACA_ECOLI
[Raw transfer]



CXV_A_2(3MZD)
DACA_ECOLI
[Raw transfer]



CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



BO9_A_2(1Z6F)
DACA_ECOLI
[Raw transfer]



HJ2_A_3(3BEC)
DACA_ECOLI
[Raw transfer]



CHAIN_L_5(3ITB)
DACC_ECOLI
[Raw transfer]
-
CHAIN_L_5(3ITB)
DACC_ECOLI
[Raw transfer]
-
21 PsiBlast_CBE 96.89100% -88 - C4 -4K91 2.8 ?
1 PsiBlast_PDB 95.15100% -86 - C4 -4K91 - ? -
4 PsiBlast_PDB 81.8348% -79 - C4 -1Z6F 4.7 DACA_ECOLI
7 PsiBlast_PDB 81.4348% -79 - C4 -3MZD 5.7 DACA_ECOLI
5 PsiBlast_PDB 80.6348% -81 - C4 -3BEB 3.7 DACA_ECOLI
9 PsiBlast_PDB 80.6248% -79 - C4 -3MZF 3.1 DACA_ECOLI
6 PsiBlast_PDB 80.1248% -79 - C4 -3BEC 3.6 DACA_ECOLI
2 PsiBlast_PDB 80.1248% -79 - C4 -1NZO - DACA_ECOLI -
17 PsiBlast_PDB 79.9744% -82 - C4 -4DRT - ? -
31 HHSearch 79.7049% -80 - C4 -3MZF 3.2 DACA_ECOLI
10 PsiBlast_PDB 79.6448% -77 - C4 -3IT9 - DACC_ECOLI -
24 PsiBlast_CBE 79.4748% -78 - C4 -3ITB - DACC_ECOLI -
3 PsiBlast_PDB 79.3648% -79 - C4 -1NZU - DACA_ECOLI -
13 PsiBlast_PDB 79.1748% -83 - C4 -1HD8 - DACA_ECOLI -
8 PsiBlast_PDB 79.0448% -81 - C4 -3MZE 4.3 DACA_ECOLI
12 PsiBlast_PDB 78.7248% -77 - C4 -3ITB - DACC_ECOLI -
26 PsiBlast_CBE 78.7048% -79 - C4 -3ITA - DACC_ECOLI -
23 PsiBlast_CBE 78.5248% -78 - C4 -3ITB 4.0 DACC_ECOLI
14 PsiBlast_PDB 77.8448% -81 - C4 -1NJ4 - DACA_ECOLI -
52 Fugue 77.7746% -84 - C4 -1HD8 - DACA_ECOLI -
22 PsiBlast_CBE 76.4148% -74 - C4 -3ITB 2.8 DACC_ECOLI
18 PsiBlast_PDB 63.5432% -74 - C4 -3MFD 3.2 DACB_BACSU
34 HHSearch 57.6033% -68 - C4 -3MFD 2.9 DACB_BACSU