@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4061: (2016-02-23 )
MSDTPYIFDVTGANFEQLVIENSFHKPVLVDFWADWCAPCKALMPLLAQIAESYQGELLLAKVNCDVEQDIVMRFGIRSLPTVVLFKDGQPVDGFAGAQPESQIRALLEPHVKAPALPDEDPLEVAQALFAEGRIGDAEATLKALLAENNENAAALILYARCLAERGELEEAQAILDAVKSDEHKQALAGARAQLTFLRQAADLPDSAELKSRLAADAGDDEAAYQLAVQQLARQQYEAALDGLLKLFLRNRGYQDDLPRKTLVQVFDLLGNDHPLVTAYRRKLYQALY

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_B_5(2EIQ)
THIO_ECOLI
[Raw transfer]




PX5_C_7(3O6T)
THIO_MYCTU
[Raw transfer]




PX5_A_5(3O6T)
THIO_MYCTU
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




MPD_B_6(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_A_14(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_D_13(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_G_11(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_11(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_B_4(2H75)
THIO_ECOLI
[Raw transfer]




MPD_A_11(2TRX)
THIO_ECOLI
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




MPD_A_3(2H72)
THIO_ECOLI
[Raw transfer]




MPD_B_8(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H70)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H70)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6X)
THIO_ECOLI
[Raw transfer]




MPD_E_9(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6Y)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H73)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H71)
THIO_ECOLI
[Raw transfer]




1 PsiBlast_PDB 92.2336%-122 - C3 -3QDN - ? -
79 PsiBlast_CBE 64.2134%-159 - C3 -3TCO - ? -
2 PsiBlast_PDB 63.6446%-155 - C3 -4TN8 - ? -
80 PsiBlast_CBE 63.4434%-152 - C3 -3TCO - ? -
5 PsiBlast_PDB 63.3143%-153 - C3 -2YJ7 - ? -
22 PsiBlast_CBE 63.1744%-156 - C3 -2YN1 - ? -
6 PsiBlast_PDB 63.1643%-151 - C3 -4ULX - ? -
13 PsiBlast_PDB 62.3342%-150 - C3 -3HHV - ? -
129 HHSearch 61.8139%-159 * C3 *2I4A 1.9 ?
21 PsiBlast_CBE 61.2640%-155 - C3 -4BA7 - ? -
63 PsiBlast_CBE 61.0342%-159 - C3 -2EIQ Error THIO_ECOLI
66 PsiBlast_CBE 60.9442%-177 - C3 -2H6Z - THIO_ECOLI -
62 PsiBlast_CBE 60.8142%-161 - C3 -2EIQ - THIO_ECOLI -
11 PsiBlast_PDB 60.7243%-136 - C3 -1NSW - THIO_ALIAC -
43 PsiBlast_CBE 60.2939%-155 - C3 -2I4A - ? -
37 PsiBlast_CBE 60.1943%-166 - C3 -2FCH - THIO_ECOLI -
64 PsiBlast_CBE 59.9342%-174 - C3 -2H72 3.1 THIO_ECOLI
81 PsiBlast_CBE 59.7234%-142 - C3 -3TCO - ? -
10 PsiBlast_PDB 59.7136%-157 - C3 -3ZIV - ? -
30 PsiBlast_CBE 59.5935%-154 - C3 -2YNX - ? -
42 PsiBlast_CBE 59.5243%-165 - C3 -2H71 2.7 THIO_ECOLI
35 PsiBlast_CBE 59.5243%-165 - C3 -2FCH 2.5 THIO_ECOLI
44 PsiBlast_CBE 59.4038%-163 - C3 -2H75 2.5 THIO_ECOLI
36 PsiBlast_CBE 59.3143%-164 - C3 -2FCH 2.2 THIO_ECOLI
69 PsiBlast_CBE 58.8545%-160 - C3 -3O6T 4.5 THIO_MYCTU
52 PsiBlast_CBE 58.6942%-163 - C3 -2TRX 4.0 THIO_ECOLI
50 PsiBlast_CBE 58.5642%-176 - C3 -2H70 2.7 THIO_ECOLI
46 PsiBlast_CBE 58.4742%-159 - C3 -2H73 2.6 THIO_ECOLI
71 PsiBlast_CBE 58.2445%-161 - C3 -3O6T 4.5 THIO_MYCTU
51 PsiBlast_CBE 58.0442%-163 - C3 -2H70 2.8 THIO_ECOLI
34 PsiBlast_CBE 58.0443%-159 - C3 -2FCH 2.8 THIO_ECOLI
47 PsiBlast_CBE 58.0042%-160 - C3 -2H6Y 2.7 THIO_ECOLI
53 PsiBlast_CBE 57.7142%-161 - C3 -2TRX 4.1 THIO_ECOLI
39 PsiBlast_CBE 57.6243%-155 - C3 -2FCH 2.7 THIO_ECOLI
54 PsiBlast_CBE 57.0042%-157 - C3 -2H6X 3.4 THIO_ECOLI
88 PsiBlast_CBE 56.9338%-151 - C3 -4POB 2.7 ?
114 Fugue 55.8633%-160 - C3 -2TRX 3.9 THIO_ECOLI