@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4068: (2016-02-23 )
MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTRDFIYVADLVDFLVQALEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD2_E_5(1SB8)
?
[Raw transfer]



UD2_E_5(1SB8)
?
[Raw transfer]



UPG_E_5(1SB9)
?
[Raw transfer]



NAD_B_5(4ZRN)
?
[Raw transfer]



NAD_A_3(3EHE)
?
[Raw transfer]



NAD_B_6(4ZRM)
?
[Raw transfer]



NAD_A_3(4ZRN)
?
[Raw transfer]



NAD_B_4(3EHE)
?
[Raw transfer]



NAD_A_3(4ZRM)
?
[Raw transfer]



NAD_A_2(3KO8)
?
[Raw transfer]



NAD_A_3(4GLL)
UXS1_HUMAN
[Raw transfer]



NAD_A_2(3ICP)
?
[Raw transfer]



NAD_A_5(2P5U)
?
[Raw transfer]



NAD_A_2(3KO8)
?
[Raw transfer]



NAD_A_2(2P5Y)
?
[Raw transfer]



NAD_B_6(4GLL)
UXS1_HUMAN
[Raw transfer]



NAD_A_5(3AW9)
?
[Raw transfer]



NAD_D_8(2P5U)
?
[Raw transfer]



NAD_B_7(3AW9)
?
[Raw transfer]



NAD_C_9(3AW9)
?
[Raw transfer]



NAD_A_2(4WOK)
?
[Raw transfer]



NAD_C_7(2P5U)
?
[Raw transfer]



NAD_A_2(4TWR)
?
[Raw transfer]



NAD_B_6(2P5U)
?
[Raw transfer]



GOL_B_7(4ZRM)
?
[Raw transfer]



GOL_A_5(4ZRM)
?
[Raw transfer]



GAI_A_4(4GLL)
UXS1_HUMAN
[Raw transfer]
4 PsiBlast_PDB 81.5737% -91 - C1 -4ZRN 12.3 ?
24 PsiBlast_CBE 80.7737% -90 - C1 -4ZRN 12.3 ?
107 HHSearch 79.2631% -93 - C1 -1R6D - ? -
25 PsiBlast_CBE 77.6337% -89 - C1 -4ZRM 11.8 ?
3 PsiBlast_PDB 77.0437% -88 - C1 -4ZRM 12.1 ?
109 HHSearch 75.4628% -93 - C1 -2HUN - ? -
115 HHSearch 74.7432% -81 - C1 -1SB8 8.1 ?
113 HHSearch 74.4332% -94 - C1 -2C20 - ? -
23 PsiBlast_CBE 73.7041% -87 - C1 -2P5U 11.0 ?
125 Fugue 73.4727% -89 - C1 -1Z45 - GAL10_YEAST -
2 PsiBlast_PDB 73.4141% -81 - C1 -2P5Y 11.9 ?
70 PsiBlast_CBE 72.1233% -87 - C1 -1R66 - ? -
69 PsiBlast_CBE 72.0533% -86 * C1 *1R6D - ? -
108 HHSearch 71.9333% -84 - C1 -3VPS - ? -
21 PsiBlast_CBE 71.6741% -81 - C1 -2P5U 10.8 ?
111 HHSearch 71.4232% -89 - C1 -3KO8 12.7 ?
22 PsiBlast_CBE 71.3341% -78 - C1 -2P5U 11.8 ?
1 PsiBlast_PDB 70.7641% -80 - C1 -2P5U 10.2 ?
102 HHSearch 70.6027% -80 - C1 -1ORR - RFBE_SALTI -
8 PsiBlast_PDB 70.0933% -87 - C1 -3RUD - GNE_PLESH -
67 PsiBlast_CBE 68.7834% -87 - C1 -4WOK 11.7 ?
68 PsiBlast_CBE 67.3734% -89 - C1 -4TWR 11.8 ?
16 PsiBlast_PDB 63.9635%-101 - C1 -3EHE 12.0 ?
51 PsiBlast_CBE 63.6835% -98 - C1 -3EHE 12.2 ?
14 PsiBlast_PDB 60.1835% -82 - C1 -1SB9 6.2 ?
13 PsiBlast_PDB 59.3835% -78 - C1 -1SB8 8.1 ?
18 PsiBlast_PDB 59.2737%-107 - C1 -4GLL 12.4 UXS1_HUMAN
61 PsiBlast_CBE 59.2034% -81 - C1 -3KO8 12.7 ?
57 PsiBlast_CBE 59.1837%-113 - C1 -4GLL 12.6 UXS1_HUMAN
20 PsiBlast_PDB 57.5834% -77 - C1 -3ICP 12.2 ?
81 PsiBlast_CBE 54.1333% -78 - C1 -3AW9 10.8 ?
80 PsiBlast_CBE 53.4633% -81 - C1 -3AW9 11.2 ?
79 PsiBlast_CBE 51.1033% -80 - C1 -3AW9 10.9 ?