@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4140: (2016-02-24 )
MHDLIQHADAFVGDPDQESGGLSRRSFLGKSATLGAVGLVAGWTPAFVIQPAEAAASSCPAPAGFPAGLELYRRAFRNWSGEIAADDLWSCAPRTNEEVLAVVNWAWQNGFKVRPRGMGHNWSPLLLKGGENCESRIVLVETSRYLTRVRIDAQGEFGLFSAQTGVTMEALLKQLERVKLGFVATPAPGDLTLGGVLAIDGHGTGIPAQGESRLPGQSYGSLSNSIVALTAVVWDGAAGQYVLKTFRRDDPACAPFLVHLGRAFIVEATLQAGVNKRMRCQSYVNIPASEMFAAAGSGGRTFDSFLQKSGRAEAIWFPFTDKPWLKVWTPTPRCPFGARAVNGPFNYPFSDNIPKALSDLLAAINTGHPELTPLLGKLQYDLVVGGMALTLGYDLWGWSKDLLLYIKPSTLRVTANGYAVLTRRRDVQRVINEFYLQYQTMVAAYRANGHYPMNGPVEIRVSGLDQPGESIVPGAQVPSLSAIRPRPDQPEWDTAIWLDILSLPGTPQANAFYHEFEAWLFDHFSGDYASLRVEWSKGWGYSPAAAWDEPTVVDQLVAQSLRQGLVADNDWDSAVRQLNEADPHRLFSSPLLDRLMP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(3JS8)
?
[Raw transfer]



FAD_A_2(3JS8)
?
[Raw transfer]



FAD_A_19(1I19)
?
[Raw transfer]



FAD_A_19(1I19)
?
[Raw transfer]



FAD_B_20(1I19)
?
[Raw transfer]



FAD_A_6(2I0K)
?
[Raw transfer]



FAD_A_6(2I0K)
?
[Raw transfer]



EDO_A_7(1I19)
?
[Raw transfer]



EDO_B_12(1I19)
?
[Raw transfer]



EDO_A_7(1I19)
?
[Raw transfer]



EDO_A_7(1I19)
?
[Raw transfer]
18 HHSearch 98.9659% -93 - C2 -3JS8 10.2 ?
1 PsiBlast_PDB 98.5758% -91 - C2 -3JS8 10.4 ?
38 Fugue 92.0045% -86 - C2 -1I19 11.7 ?
2 PsiBlast_PDB 91.4943% -89 - C2 -1I19 11.7 ?
17 PsiBlast_CBE 91.2143% -90 - C2 -1I19 12.1 ?
3 PsiBlast_PDB 90.3143% -88 - C2 -2I0K 12.6 ?
19 HHSearch 89.1042% -83 - C2 -2I0K 12.6 ?
39 Fugue 82.3238% -83 - C2 -1I19 2.2 ?
20 HHSearch 56.7319% -65 * C2 *2VFR - XYOA_STRCO -
40 Fugue 54.7530% -70 - C2 -1I19 3.1 ?
41 Fugue 54.3829% -86 - C2 -1I19 - ? -
43 Fugue 50.6914% -60 - C2 -2VFR - XYOA_STRCO -
46 Fugue 47.5114% -43 - C2 -2IPI - AKNOX_STRGJ -
45 Fugue 47.1917% -43 - C2 -4FDO - DPRE1_MYCTU -
24 HHSearch 46.8419% -90 - C2 -3PM9 - ? -
27 HHSearch 46.5716% -80 - C2 -3VTE - THCAS_CANSA -
29 HHSearch 46.5223% -80 - C2 -2Y3S - ? -
31 HHSearch 45.9118% -78 - C2 -3POP - ? -
25 HHSearch 45.6915% -85 - C2 -3RJA - ? -
32 HHSearch 44.4618% -84 - C2 -3FW9 - RETO_ESCCA -