@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4148: (2016-02-24 )
MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRIVNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGMWRGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLACAPHVTGQAIAVDGGFSL

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_C_23(3RIH)
?
[Raw transfer]



EDO_C_23(3RIH)
?
[Raw transfer]



EDO_A_10(3RIH)
?
[Raw transfer]



NAD_A_5(3AK4)
?
[Raw transfer]



NAI_C_8(4NBU)
?
[Raw transfer]



NAI_A_5(4NBU)
?
[Raw transfer]



NAD_B_4(3WYE)
?
[Raw transfer]



NAI_D_9(4NBU)
?
[Raw transfer]



NAD_A_5(3WDS)
?
[Raw transfer]



NAD_C_7(3AK4)
?
[Raw transfer]



NAD_A_3(3WYE)
?
[Raw transfer]



NAD_B_6(3AK4)
?
[Raw transfer]



NAD_C_11(3WDS)
?
[Raw transfer]



NAD_A_5(3WDS)
?
[Raw transfer]



NAD_D_8(3AK4)
?
[Raw transfer]



NAD_B_8(3WDS)
?
[Raw transfer]



EDO_C_26(3RIH)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_12(3RIH)
?
[Raw transfer]



EDO_D_14(4WEO)
?
[Raw transfer]



PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]



THJ_A_4(3GED)
?
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]
22 PsiBlast_CBE 93.4658%-105 - C1 -4WEO - ? -
21 PsiBlast_CBE 91.3958%-105 - C1 -4WEO 3.0 ?
23 PsiBlast_CBE 91.3158%-106 - C1 -4WEO - ? -
1 PsiBlast_PDB 90.1658%-107 - C1 -4WEO - ? -
14 PsiBlast_PDB 84.1538% -93 - C1 -3WYE 7.0 ?
15 PsiBlast_PDB 83.9837%-109 - C1 -4J2H - ? -
134 HHSearch 83.4542% -97 - C1 -3WDS 10.8 ?
39 PsiBlast_CBE 83.4539% -94 - C1 -1GEG - BUDC_KLEPN -
41 PsiBlast_CBE 82.7239% -96 - C1 -1GEG - BUDC_KLEPN -
70 PsiBlast_CBE 82.7134% -99 - C1 -2ZTL - ? -
38 PsiBlast_CBE 82.5839% -94 - C1 -1GEG - BUDC_KLEPN -
31 PsiBlast_CBE 82.4341%-101 - C1 -3AK4 10.5 ?
44 PsiBlast_CBE 82.4038%-104 - C1 -3WYE 7.6 ?
37 PsiBlast_CBE 82.2139% -92 - C1 -1GEG - BUDC_KLEPN -
132 HHSearch 82.1435%-101 - C1 -3ICC - ? -
71 PsiBlast_CBE 82.1434% -99 - C1 -2ZTL - ? -
42 PsiBlast_CBE 81.8839% -96 - C1 -1GEG - BUDC_KLEPN -
62 PsiBlast_CBE 81.8533%-113 - C1 -3R1I - ? -
3 PsiBlast_PDB 81.7137%-103 - C1 -2UVD - ? -
6 PsiBlast_PDB 81.6241%-101 - C1 -3AK4 10.8 ?
29 PsiBlast_CBE 81.0341%-101 - C1 -3WDS 10.3 ?
28 PsiBlast_CBE 80.7241%-100 - C1 -3WDS 10.3 ?
30 PsiBlast_CBE 80.6941%-102 - C1 -3AK4 10.7 ?
10 PsiBlast_PDB 80.4438%-104 - C1 -3OSU 2.6 FABG_STAAM
45 PsiBlast_CBE 80.3734%-113 - C1 -4NBU 8.0 ?
88 PsiBlast_CBE 80.0239%-106 - C1 -3RIH Error ?
32 PsiBlast_CBE 79.5241%-100 - C1 -3AK4 10.5 ?
7 PsiBlast_PDB 79.3741%-101 - C1 -3WDS 10.8 ?
46 PsiBlast_CBE 79.1634%-113 - C1 -4NBU 7.7 ?
89 PsiBlast_CBE 79.1539%-106 - C1 -3RIH 3.6 ?
16 PsiBlast_PDB 78.8734%-113 - C1 -4NBU 9.8 ?
91 PsiBlast_CBE 78.4139%-105 - C1 -3RIH 2.5 ?
90 PsiBlast_CBE 77.8739%-104 - C1 -3RIH Error ?
97 PsiBlast_CBE 70.4133%-109 - C1 -4I08 3.0 FABG_VIBCH
101 PsiBlast_CBE 68.0533%-104 - C1 -3RRO 2.9 FABG_VIBCH
100 PsiBlast_CBE 67.1033%-104 - C1 -3RRO 2.6 FABG_VIBCH