@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4158: (2016-02-24 )
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVARGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDLNQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADAPG

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]
1 PsiBlast_PDB 91.0033%-142 - C1 -4G1U - HMUV_YERPE -
21 PsiBlast_CBE 90.8033%-142 - C1 -4G1U - HMUV_YERPE -
2 PsiBlast_PDB 77.0732%-114 - C1 -3GFO - ECFA3_CLOP1 -
22 PsiBlast_CBE 76.8035%-129 - C1 -2IT1 - ? -
89 HHSearch 76.4028%-118 * C1 *3TUI - METN_ECOLI -
100 HHSearch 76.3631%-111 - C1 -1B0U - HISP_SALTY -
97 HHSearch 76.2128%-116 - C1 -3GFO - ECFA3_CLOP1 -
3 PsiBlast_PDB 74.8535%-127 - C1 -2IT1 - ? -
87 HHSearch 74.1329%-120 - C1 -3RLF - MALK_ECOLI -
71 PsiBlast_CBE 73.6831%-127 - C1 -1Z47 - ? -
106 Fugue 73.3624%-113 - C1 -3TUZ - METN_ECOLI -
72 PsiBlast_CBE 72.9731%-124 - C1 -4HLU - ECFA1_THEMA -
70 PsiBlast_CBE 72.7831%-124 - C1 -1Z47 - ? -
111 Fugue 71.7126%-114 - C1 -1Z47 - ? -
19 PsiBlast_PDB 71.1530%-128 - C1 -1VCI - ? -
41 PsiBlast_CBE 70.0531%-141 - C1 -2YYZ - ? -
91 HHSearch 69.5228%-112 - C1 -3D31 - ? -
84 HHSearch 69.2930%-111 - C1 -2IT1 - ? -
20 PsiBlast_PDB 69.1330%-126 - C1 -1V43 - ? -
38 PsiBlast_CBE 68.9734%-121 - C1 -1L2T 4.5 Y796_METJA
29 PsiBlast_CBE 68.5832%-118 - C1 -3C4J 3.7 ?
39 PsiBlast_CBE 68.1334%-124 - C1 -3TIF 4.5 Y796_METJA
18 PsiBlast_PDB 68.1134%-119 - C1 -1L2T 4.5 Y796_METJA
35 PsiBlast_CBE 66.7332%-112 - C1 -2OLK 4.7 ?
13 PsiBlast_PDB 66.7032%-113 - C1 -2OLK 4.3 ?
28 PsiBlast_CBE 66.6432%-113 - C1 -3C41 4.0 ?
34 PsiBlast_CBE 66.5832%-112 - C1 -2OLK 4.5 ?
40 PsiBlast_CBE 66.5734%-118 - C1 -3TIF 4.3 Y796_METJA
15 PsiBlast_PDB 66.5632%-111 - C1 -2Q0H 3.6 ?
12 PsiBlast_PDB 66.5532%-112 - C1 -2OLJ 4.2 ?
36 PsiBlast_CBE 65.5532%-112 - C1 -2OLK 4.2 ?
30 PsiBlast_CBE 65.3832%-111 - C1 -2Q0H 4.4 ?
11 PsiBlast_PDB 65.0932%-107 - C1 -3C41 4.8 ?
16 PsiBlast_PDB 64.3832%-109 - C1 -3C4J 4.7 ?
24 PsiBlast_CBE 63.7032%-111 - C1 -4YMU 4.3 ?
9 PsiBlast_PDB 63.2335%-104 - C1 -4U00 4.4 ?
37 PsiBlast_CBE 63.1732%-106 - C1 -2OLJ 3.9 ?
74 PsiBlast_CBE 62.9931%-103 - C1 -4AYX 3.2 ABCBA_HUMAN
6 PsiBlast_PDB 62.8832%-109 - C1 -4YMU 4.7 ?
23 PsiBlast_CBE 62.6932%-110 - C1 -4YMV 3.7 ?
7 PsiBlast_PDB 62.4732%-110 - C1 -4YMV 4.1 ?