@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4167: (2016-02-24 )
MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGNGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGKVLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD

Atome Classification :

(82 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]




NDP_A_2(1Z3N)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDU)
ALDR_HUMAN
[Raw transfer]




NDP_B_6(3WBW)
?
[Raw transfer]




NAP_A_2(4Q7B)
ALDR_HUMAN
[Raw transfer]




NAP_A_5(4JIR)
ALDR_HUMAN
[Raw transfer]




NDP_B_2(2F2K)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2ISF)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4PR4)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3LEN)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PD5)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4QR6)
?
[Raw transfer]




NAP_A_2(2PDQ)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3LEP)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4QXI)
?
[Raw transfer]




NAP_A_2(2IPW)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4GCA)
ALDR_HUMAN
[Raw transfer]




NAP_B_2(1EL3)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3LQL)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDI)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4QX4)
ALDR_HUMAN
[Raw transfer]




NAP_B_2(1AZ1)
ALDR_HUMAN
[Raw transfer]




NAP_B_2(1T40)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4PRR)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2IS7)
ALDR_HUMAN
[Raw transfer]




NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]




NAP_A_2(2PD9)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDB)
ALDR_HUMAN
[Raw transfer]




NDP_B_4(3D3F)
GR_BACSU
[Raw transfer]




NAP_B_4(1VP5)
?
[Raw transfer]




NDP_A_2(3G5E)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3LZ3)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3MB9)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3LQG)
ALDR_HUMAN
[Raw transfer]




NAP_A_3(4GIE)
PGFS_TRYCC
[Raw transfer]




NDP_A_3(4G5D)
PGFS_LEIMA
[Raw transfer]




NAP_A_2(3LD5)
ALDR_HUMAN
[Raw transfer]




NAP_A_3(1VP5)
?
[Raw transfer]




NAP_A_2(3T42)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDC)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3ONB)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(4QBX)
?
[Raw transfer]




NAP_A_2(2PDK)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(3ONC)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDW)
ALDR_HUMAN
[Raw transfer]




NAP_A_3(1VP5)
?
[Raw transfer]




NDP_B_4(4G5D)
PGFS_LEIMA
[Raw transfer]




NAP_A_4(4PUW)
ALDR_HUMAN
[Raw transfer]




NDP_A_4(3WBW)
?
[Raw transfer]




NDP_A_4(3WBW)
?
[Raw transfer]




NAP_B_2(1AZ2)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(1IEI)
ALDR_HUMAN
[Raw transfer]




NDP_A_3(3D3F)
GR_BACSU
[Raw transfer]




NAP_A_3(2AGT)
ALDR_HUMAN
[Raw transfer]




NAD_C_3(1M9H)
DKGA_CORSC
[Raw transfer]




NAP_A_2(2PDJ)
ALDR_HUMAN
[Raw transfer]




NAP_A_2(2PDL)
ALDR_HUMAN
[Raw transfer]




NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]




NAP_D_4(1VBJ)
PGFS_TRYBB
[Raw transfer]




NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]




NAP_A_3(4I5X)
AK1BA_HUMAN
[Raw transfer]




EDO_A_3(4GAC)
AK1A1_MOUSE
[Raw transfer]




EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]




EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]




GOL_C_10(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]




CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]




NDP_A_3(3WBY)
?
[Raw transfer]




NA7_A_3(2WZM)
Y2407_MYCS2
[Raw transfer]




GOL_I_9(1MZR)
DKGA_ECOLI
[Raw transfer]




NA7_B_4(2WZM)
Y2407_MYCS2
[Raw transfer]




NA7_A_3(2WZM)
Y2407_MYCS2
[Raw transfer]




ALR_C_3(1AZ1)
ALDR_HUMAN
[Raw transfer]




GLU_B_4(4FZI)
PGFS_TRYCC
[Raw transfer]




NDP_B_4(3WBY)
?
[Raw transfer]




CIT_F_6(1VBJ)
PGFS_TRYBB
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




2WQ_A_2(4PUW)
ALDR_HUMAN
[Raw transfer]




GOL_C_10(3O0K)
?
[Raw transfer]




2CL_A_3(2IPW)
ALDR_HUMAN
[Raw transfer]




EDO_B_23(4F40)
PGFS_LEIMA
[Raw transfer]




ALR_D_4(1AZ1)
ALDR_HUMAN
[Raw transfer]




111 HHSearch 87.6946% -94 - C3 -3UP8 - ? -
1 PsiBlast_PDB 86.0846% -88 - C3 -3UP8 - ? -
63 PsiBlast_CBE 84.4534%-101 - C3 -3LQG 10.5 ALDR_HUMAN
70 PsiBlast_CBE 84.3133%-103 - C3 -3LEP 10.3 ALDR_HUMAN
39 PsiBlast_CBE 84.2539% -96 - C3 -3B3D - YTBE_BACSU -
62 PsiBlast_CBE 84.2334%-101 - C3 -3LQL 10.9 ALDR_HUMAN
64 PsiBlast_CBE 84.1234% -99 - C3 -2ISF 10.4 ALDR_HUMAN
38 PsiBlast_CBE 83.9239% -95 - C3 -3B3D - YTBE_BACSU -
73 PsiBlast_CBE 83.8733% -98 - C3 -3LEN 10.7 ALDR_HUMAN
67 PsiBlast_CBE 83.8034% -98 - C3 -1AZ1 10.6 ALDR_HUMAN
94 PsiBlast_CBE 83.7433%-100 - C3 -2PDU 10.9 ALDR_HUMAN
96 PsiBlast_CBE 83.6933% -99 - C3 -4QXI 10.3 ?
72 PsiBlast_CBE 83.6733%-102 - C3 -3LZ3 10.4 ALDR_HUMAN
84 PsiBlast_CBE 83.5333% -98 - C3 -2F2K 10.4 ALDR_HUMAN
61 PsiBlast_CBE 83.5234% -98 - C3 -3MB9 10.5 ALDR_HUMAN
78 PsiBlast_CBE 83.5033% -99 - C3 -2PDI 10.4 ALDR_HUMAN
15 PsiBlast_PDB 83.4739% -95 - C3 -3B3D - YTBE_BACSU -
59 PsiBlast_CBE 83.4534%-100 - C3 -3ONC 10.5 ALDR_HUMAN
69 PsiBlast_CBE 83.3334% -99 - C3 -2PD5 10.7 ALDR_HUMAN
82 PsiBlast_CBE 83.2433% -99 - C3 -4GCA 10.7 ALDR_HUMAN
57 PsiBlast_CBE 83.2333% -97 - C3 -2AGT 9.0 ALDR_HUMAN
74 PsiBlast_CBE 83.1033%-100 - C3 -3LD5 10.6 ALDR_HUMAN
79 PsiBlast_CBE 82.8633% -98 - C3 -4Q7B 10.1 ALDR_HUMAN
83 PsiBlast_CBE 82.8233% -99 - C3 -4JIR 10.3 ALDR_HUMAN
81 PsiBlast_CBE 82.8033%-100 - C3 -4PR4 10.1 ALDR_HUMAN
85 PsiBlast_CBE 82.7733% -99 - C3 -1T40 10.9 ALDR_HUMAN
87 PsiBlast_CBE 82.7233%-100 - C3 -1EL3 11.0 ALDR_HUMAN
99 PsiBlast_CBE 82.6533% -99 - C3 -4QBX 10.4 ?
98 PsiBlast_CBE 82.6333% -98 - C3 -4QR6 10.3 ?
76 PsiBlast_CBE 82.6133% -99 - C3 -2PDK 10.5 ALDR_HUMAN
80 PsiBlast_CBE 82.6033% -99 - C3 -4PRR 10.3 ALDR_HUMAN
93 PsiBlast_CBE 82.5733% -99 - C3 -2PDW 10.4 ALDR_HUMAN
89 PsiBlast_CBE 82.5233% -99 - C3 -2PDB 10.9 ALDR_HUMAN
65 PsiBlast_CBE 82.5234% -99 - C3 -2IPW 10.5 ALDR_HUMAN
88 PsiBlast_CBE 82.3633% -99 - C3 -2PDC 10.7 ALDR_HUMAN
58 PsiBlast_CBE 82.3634% -99 - C3 -2IS7 10.1 ALDR_HUMAN
77 PsiBlast_CBE 82.3533% -96 - C3 -2PDJ 10.2 ALDR_HUMAN
95 PsiBlast_CBE 82.3433% -97 - C3 -2PDQ 10.4 ALDR_HUMAN
92 PsiBlast_CBE 82.3233%-100 - C3 -1Z3N 10.3 ALDR_HUMAN
36 PsiBlast_CBE 82.3037% -91 - C3 -4G5D 11.2 PGFS_LEIMA
97 PsiBlast_CBE 82.2633% -98 - C3 -4QX4 10.2 ALDR_HUMAN
60 PsiBlast_CBE 82.1734% -99 - C3 -3ONB 10.6 ALDR_HUMAN
100 PsiBlast_CBE 82.1633% -97 - C3 -4PUW 10.3 ALDR_HUMAN
91 PsiBlast_CBE 81.9833% -99 - C3 -3G5E 10.7 ALDR_HUMAN
68 PsiBlast_CBE 81.9534% -98 - C3 -2PD9 10.3 ALDR_HUMAN
14 PsiBlast_PDB 81.7737% -91 - C3 -4G5D 11.2 PGFS_LEIMA
75 PsiBlast_CBE 81.5933% -99 - C3 -2PDL 10.7 ALDR_HUMAN
90 PsiBlast_CBE 81.4533% -97 - C3 -3T42 10.3 ALDR_HUMAN
40 PsiBlast_CBE 81.2140% -96 - C3 -2WZM 2.7 Y2407_MYCS2
16 PsiBlast_PDB 80.9040% -95 - C3 -2WZM 3.9 Y2407_MYCS2
66 PsiBlast_CBE 80.2434% -92 - C3 -1AZ2 9.0 ALDR_HUMAN
5 PsiBlast_PDB 80.0536% -83 - C3 -4FZI 2.7 PGFS_TRYCC
114 HHSearch 79.9638% -93 - C3 -2WZM 4.6 Y2407_MYCS2
37 PsiBlast_CBE 79.9137% -93 - C3 -4F40 3.3 PGFS_LEIMA
2 PsiBlast_PDB 79.5239% -89 - C3 -3WBW 8.1 ?
13 PsiBlast_PDB 79.5137% -90 - C3 -4F40 2.3 PGFS_LEIMA
22 PsiBlast_CBE 79.4839% -92 - C3 -3WBW 9.7 ?
6 PsiBlast_PDB 79.3336% -84 - C3 -4GIE 7.4 PGFS_TRYCC
26 PsiBlast_CBE 79.1336% -85 - C3 -4FZI 2.1 PGFS_TRYCC
52 PsiBlast_CBE 79.0631% -97 - C3 -4GAC 2.8 AK1A1_MOUSE
11 PsiBlast_PDB 78.8439% -87 - C3 -3D3F 10.2 GR_BACSU
42 PsiBlast_CBE 78.7839% -86 - C3 -1M9H 6.2 DKGA_CORSC
19 PsiBlast_PDB 78.6539% -90 - C3 -1A80 9.7 DKGA_CORSC
34 PsiBlast_CBE 78.5539% -93 - C3 -3D3F 9.9 GR_BACSU
86 PsiBlast_CBE 78.3733% -92 - C3 -1IEI 9.3 ALDR_HUMAN
126 HHSearch 78.2139% -93 - C3 -3WBW 8.1 ?
43 PsiBlast_CBE 77.5532% -95 - C3 -4I5X 10.1 AK1BA_HUMAN
27 PsiBlast_CBE 77.3939% -92 - C3 -3WBY 5.7 ?
7 PsiBlast_PDB 76.5439% -90 - C3 -3WBY 4.9 ?
23 PsiBlast_CBE 75.6138% -88 - C3 -3O0K 2.7 ?
25 PsiBlast_CBE 75.5038% -90 - C3 -3O0K 2.7 ?
18 PsiBlast_PDB 75.4936% -89 - C3 -1VBJ 10.1 PGFS_TRYBB
24 PsiBlast_CBE 75.3838% -93 - C3 -3O0K 2.8 ?
118 HHSearch 75.2638% -92 - C3 -3O0K 2.7 ?
41 PsiBlast_CBE 75.1636% -87 - C3 -1VBJ 8.0 PGFS_TRYBB
9 PsiBlast_PDB 74.8635% -82 - C3 -1MZR 2.6 DKGA_ECOLI
112 HHSearch 74.7135% -86 - C3 -1VBJ 8.0 PGFS_TRYBB
4 PsiBlast_PDB 74.7138% -87 - C3 -3O0K 2.7 ?
122 HHSearch 74.0632% -90 - C3 -3H7U 8.0 AKRC9_ARATH
113 HHSearch 71.2733% -82 - C3 -1VP5 5.7 ?
54 PsiBlast_CBE 71.1834%-103 - C3 -1VP5 5.2 ?
53 PsiBlast_CBE 70.2934%-103 - C3 -1VP5 6.6 ?