@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4202: (2016-02-24 )
MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEELRG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(4QIT)
?
[Raw transfer]



FMN_B_4(4Q4K)
?
[Raw transfer]



FMN_B_4(4QIS)
?
[Raw transfer]



FMN_B_5(4QIU)
?
[Raw transfer]



FMN_A_3(4QIS)
?
[Raw transfer]



FMN_A_3(4QIU)
?
[Raw transfer]



FMN_B_5(4QIT)
?
[Raw transfer]



FMN_A_3(4Q4K)
?
[Raw transfer]



FMN_B_10(4IQL)
?
[Raw transfer]



FMN_A_3(4IQL)
?
[Raw transfer]
21 PsiBlast_CBE 98.99100%-105 - C2 -4Q4K 9.9 ?
22 PsiBlast_CBE 98.52100%-104 - C2 -4QIS 8.8 ?
1 PsiBlast_PDB 98.39100%-104 * C2 *4Q4K 10.0 ?
23 PsiBlast_CBE 98.3799%-106 - C2 -4QIT 8.9 ?
24 PsiBlast_CBE 98.2999%-107 - C2 -4QIU 9.2 ?
3 PsiBlast_PDB 97.8199%-108 - C2 -4QIT 8.9 ?
4 PsiBlast_PDB 97.5699%-105 - C2 -4QIU 9.3 ?
2 PsiBlast_PDB 96.90100%-107 - C2 -4QIS 8.6 ?
7 PsiBlast_PDB 72.5732% -91 - C2 -3BO9 - ? -
63 HHSearch 71.9936% -94 - C2 -3BO9 - ? -
25 PsiBlast_CBE 70.8033% -98 - C2 -2Z6J - ? -
61 HHSearch 70.5537% -94 - C2 -2Z6I - ? -
5 PsiBlast_PDB 70.0133% -96 - C2 -2Z6J - ? -
6 PsiBlast_PDB 68.9432% -94 - C2 -2Z6I - ? -
84 Fugue 68.6331% -93 - C2 -2GJL - 2NPD_PSEAE -
62 HHSearch 67.5430% -97 - C2 -2GJL - 2NPD_PSEAE -
9 PsiBlast_PDB 67.1130% -88 - C2 -2GJN - 2NPD_PSEAE -
8 PsiBlast_PDB 66.7430% -90 - C2 -2GJL - 2NPD_PSEAE -
26 PsiBlast_CBE 64.1632% -98 - C2 -4IQL 8.3 ?
10 PsiBlast_PDB 63.8632% -97 - C2 -4IQL 8.5 ?