@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4221: (2016-02-25 )
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLDEAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDRYRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKWDTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARFLNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEVYQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTSTEYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNPNWNNRYGEPRSFNVSLRGAF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

188_A_11(1XKW)
FPTA_PSEAE
[Raw transfer]



188_A_11(1XKW)
FPTA_PSEAE
[Raw transfer]
1 PsiBlast_PDB 92.20100% -25 - C5 -1XKW 5.9 FPTA_PSEAE
33 HHSearch 91.37100% -28 - C5 -1XKW 5.9 FPTA_PSEAE
3 PsiBlast_PDB 72.1835% -6 - C5 -2O5P - FPVA_PSEAE -
5 PsiBlast_PDB 71.5835% -7 - C5 -2W6T - FPVA_PSEAE -
28 PsiBlast_CBE 71.5435% -7 - C5 -2O5P - FPVA_PSEAE -
10 PsiBlast_PDB 71.4535% -8 - C5 -2W78 - FPVA_PSEAE -
7 PsiBlast_PDB 71.3335% -8 - C5 -2W75 - FPVA_PSEAE -
9 PsiBlast_PDB 71.2635% -9 - C5 -2W77 - FPVA_PSEAE -
24 PsiBlast_CBE 71.2135% -7 - C5 -2W75 - FPVA_PSEAE -
25 PsiBlast_CBE 71.2035% -6 - C5 -2W6U - FPVA_PSEAE -
6 PsiBlast_PDB 71.2035% -9 - C5 -2W6U - FPVA_PSEAE -
21 PsiBlast_CBE 71.1035% -8 - C5 -2W78 - FPVA_PSEAE -
22 PsiBlast_CBE 70.9435% -8 - C5 -2W77 - FPVA_PSEAE -
34 HHSearch 70.9035% -13 * C5 *2W16 - FPVA_PSEAE -
8 PsiBlast_PDB 70.8435% -7 - C5 -2W76 - FPVA_PSEAE -
27 PsiBlast_CBE 70.7635% -7 - C5 -2W16 - FPVA_PSEAE -
26 PsiBlast_CBE 70.7635% -7 - C5 -2W6T - FPVA_PSEAE -
11 PsiBlast_PDB 70.7134% -7 - C5 -1XKH - FPVA_PSEAE -
23 PsiBlast_CBE 70.5035% -9 - C5 -2W76 - FPVA_PSEAE -
4 PsiBlast_PDB 70.4435% -8 - C5 -2W16 - FPVA_PSEAE -