@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4236: (2016-02-25 )
MEEKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDVPEQIQRRQIGLFLKVDPAYGKGVADALGLKLD

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(3HB6)
CATA_PROMI
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]




FMT_A_6(1QWM)
CATA_HELPY
[Raw transfer]




FMT_B_7(1QWM)
CATA_HELPY
[Raw transfer]




1 PsiBlast_PDB 98.8776% -63 - C9 -3HB6 13.0 CATA_PROMI
3 PsiBlast_PDB 93.9359% -64 - C9 -1QWM 12.6 CATA_HELPY
21 PsiBlast_CBE 93.9259% -63 - C9 -1QWM 12.6 CATA_HELPY
109 HHSearch 93.6260% -62 - C9 -1QWL 12.4 CATA_HELPY
22 PsiBlast_CBE 93.3659% -61 - C9 -1QWL 12.6 CATA_HELPY
2 PsiBlast_PDB 93.3659% -62 - C9 -1QWL 12.4 CATA_HELPY
10 PsiBlast_PDB 89.6451% -57 - C9 -1DGF - CATA_HUMAN -
103 HHSearch 89.6051% -58 * C9 *1DGF - CATA_HUMAN -
36 PsiBlast_CBE 89.2851% -56 - C9 -1DGG - CATA_HUMAN -
40 PsiBlast_CBE 88.9851% -56 - C9 -1DGF - CATA_HUMAN -
41 PsiBlast_CBE 88.8451% -56 - C9 -1DGF - CATA_HUMAN -
39 PsiBlast_CBE 88.6651% -55 - C9 -1DGF - CATA_HUMAN -
26 PsiBlast_CBE 88.6551% -58 - C9 -1QQW - CATA_HUMAN -
27 PsiBlast_CBE 88.6051% -58 - C9 -1QQW - CATA_HUMAN -
37 PsiBlast_CBE 88.5951% -58 - C9 -1DGG - CATA_HUMAN -
35 PsiBlast_CBE 88.5951% -57 - C9 -1DGB - CATA_HUMAN -
34 PsiBlast_CBE 88.5451% -55 - C9 -1DGB - CATA_HUMAN -
6 PsiBlast_PDB 88.5251% -57 - C9 -1F4J - CATA_HUMAN -
9 PsiBlast_PDB 88.4951% -56 - C9 -1DGG - CATA_HUMAN -
33 PsiBlast_CBE 88.4851% -55 - C9 -1DGB - CATA_HUMAN -
61 PsiBlast_CBE 88.2351% -58 - C9 -7CAT 12.0 CATA_BOVIN
60 PsiBlast_CBE 87.9851% -55 - C9 -8CAT 12.1 CATA_BOVIN
16 PsiBlast_PDB 87.7451% -58 - C9 -7CAT 12.0 CATA_BOVIN
17 PsiBlast_PDB 87.2851% -56 - C9 -8CAT 11.8 CATA_BOVIN
101 HHSearch 85.6444% -54 - C9 -1GWE 12.5 CATA_MICLU